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Table 1 Overview of genome assembly and gene statistics for Emericellopsis sp. TS7, Calycina marina and Amylocarpus encephaloides

From: Genomic characterization of three marine fungi, including Emericellopsis atlantica sp. nov. with signatures of a generalist lifestyle and marine biomass degradation

Isolates

Emericellopsis sp. TS7

C. marina

A. encephaloides

Genome statistics

 Genome assembly size (Mbp)

27.3

34.21

46.29

 Coverage

225.6

185.26

127.83

 # of scaffolds

114

1318

2381

 # of scaffolds > = 2 k

105

1168

1600

 Scaffold L50

14

173

168

 Scaffold N50 (Mbp)

0.76

0.05

0.07

 # of gaps

22

37

68

 % of scaffold length in gaps

0.0

0.0

0.0

 Largest scaffold

1.47

0.38

0.42

 % GC

54.2

47.6

44.9

Transcriptome and gene models

 EST mapped to genome (%)

99.2

98.8

99.0

 Average gene length

1832

1758

1770

 exons per gene

2.59

3.13

3

 # of gene models

9964

9558

11,869

 Genes/Mbp

364.98

279.39

256.41

CEGMA (%)

99.34

99.34

99.54

BGCs

35

21

34

CAZyme genes

396

217

356

KOG annotated

5201

4723

5413

KEGG annotated

1969

1670

2041