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Table 1 Genome overview

From: IMA Genome - F15

Assembly

Flye

Canu

Assembly size (Mb)

50.57

51.63

Contigs

52

111

Contig N50 (Kb)

1267

972

Mean Coverage by Nanopore (fold)

22

22

Mean Coverage by Illumina (fold)

21

21

G + C content (%)

37.96

37.65

BUSCO completeness

C:96.0%[S:95.8%,D:0.2%],F:0.5%,M:3.5%

 

Gene prediction

  

Predicted gene models

9355

 

Average gene length (bp)

1586.97

 

Gene density (genes per Mb)

184.99

 

Predicted introns

17 778

 

Introns per gene

1.9

 

Secondary metabolites

  

Total SM clusters

44

 

Type I polyketide synthetases (PKSs)

30

 

Type III PKSs

1

 

Nonribosomal peptide synthetases (NRPSs)

7

 

NRPS-like fragments

4

 

Terpene clusters

5

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