Table 2 Strains analyzed in this study, with collection details and GenBank accession numbers
Species | Strain no | Host/substrate | Country | GenBank Accession No | |||
|---|---|---|---|---|---|---|---|
LSU | ITS | TUB | TEF1-α | ||||
Articulospora tetracladia | DSM 104345 | – | – | MK226456 | MH930816 | MK241460 | MK241447 |
Ascocorticium anomalum | CBS 874.71 | – | Germany | MH872135 | – | – | – |
Cadophora africana | CBS 120890T | Prunus salicina, necrotic wood | South Africa | MT156170 | MN232936 | MN232967 | MN232988 |
Cadophora antarctica | FMR16056T | Diesel-contaminated soil sample | Antarctica | MG385663 | MG385664 | – | – |
Cadophora bubakii | CBS 198.30T | Margarine | Czech Republic | MH866559 | MH855111 | – | MN232989 |
Cadophora caespitosa | CGMCC3.20179 = MY156T | Water in Mingyong Glacier | China | MT908194 | MT889936 | MT921201 | MT900568 |
Cadophora caespitosa | CGMCC3.20180 = MY169 | Water in Mingyong Glacier | China | MT908195 | MT889937 | MT921202 | MT921172 |
Cadophora caespitosa | CGMCC3.20192 = DG1120 | Water in Dagu Glacier | China | MT908222 | MT889964 | MT921229 | MT921197 |
Cadophora caespitosa | CGMCC3.20431 = HL674 | Water in Hailuogou Glacier | China | MW793546 | MW793520 | MW818434 | MW810619 |
Cadophora caespitosa | CGMCC3.20432 = BM691 | Soil in Baima Snow Mountain | China | MW793547 | MW793521 | MW818435 | MW810620 |
Cadophora constrictospora | P1751T | Endophytic in roots of Microthlaspi | Bulgaria | MN339369 | KT269023 | – | MN325874 |
Cadophora daguensis | CGMCC3.20845 = DG5 | Soil in Dagu Glacier | China | OL477357 | OL477351 | OL674144 | OL674147 |
Cadophora daguensis | CGMCC3.20846 = DG21T | Soil in Dagu Glacier | China | OL477356 | OL714365 | OL674143 | OL674146 |
Cadophora dextrinospora | AG5 | Decayed wood in Anoplophora glabripennis galleries | Finland | – | MF188986 | – | – |
Cadophora dextrinospora | CBS 401.78T | Decaying wood | Spain | MH872917 | NR_119489 | – | – |
Cadophora domestica | CBS 146265T | From necrotic tissues from crown of Prunus domestica (Rosaceae) nursery tree | South Africa | – | MN873024 | MN873028 | MN873031 |
Cadophora fallopiae | CPC 35,742 | Reynoutria japonica | Germany | MT223877 | MT223782 | – | – |
Cadophora fascicularis | P2794T | Endophytic in roots of Microthlaspi erraticum | Germany | MN339414 | KT269992 | – | MN325918 |
Cadophora fastigiata | CBS 307.49 | Pine wood | Sweden | MH868062 | MH856538 | KM497131 | KM497087 |
Cadophora ferruginea | P1323T | Endophytic in roots of Microthlaspi perfoliatum | Spain | MN339356 | KT268618 | – | MN325861 |
Cadophora gregata | ATCC 11073T | Glycine max, brown stem rot | Japan | MF979571 | U66731 | MF677920 | MF979586 |
Cadophora helianthi | CBS 144752T | Helianthus annuus, necrotic tissue in stem | Ukraine | – | MK813837 | MH733391 | MH719029 |
Cadophora indistincta | CGMCC3.20233 = DG978 | Soil in Dagu Glacier | China | MT908210 | MT889952 | MT921217 | MT921186 |
Cadophora indistincta | CGMCC3.20234 = DG1054 | Water in Dagu Glacier | China | MT908215 | MT889957 | MT921222 | MT921191 |
Cadophora indistincta | CGMCC3.20189 = DG1014T | Water in Dagu Glacier | China | MT908211 | MT889953 | MT921218 | MT921187 |
Cadophora indistincta | CGMCC3.20195 = DG1017 | Soil in Dagu Glacier | China | MT908212 | MT889954 | MT921219 | MT921188 |
Cadophora indistincta | CGMCC3.20196 = DG1074 | Soil in Dagu Glacier | China | MT908219 | MT889961 | MT921226 | MT921194 |
Cadophora inflata | CGMCC3.20186 = MY759T | Soil in Mingyong Glacier | China | MT908204 | MT889946 | MT921211 | MT921181 |
Cadophora interclivum | CBS143323 = BAG4T | Carex sprengelii, root | Canada | MF979565 | MF979577 | MF677917 | MF979583 |
Cadophora lacrimiformis | MFLU 16-1486T | Unknown Brassicaceae, dead stem | Russia | MK591959 | MK585003 | – | – |
Cadophora luteo-olivacea | CBS 141.41T | Waste water | Sweden | MH867586 | MH856092 | KM497133 | JN808856 |
Cadophora luteo-olivacea | GLMC 517 | Prunus domestica, necrotic wood | Germany | – | MN232937 | MN232968 | MN233003 |
Cadophora magna | CGMCC3.20188 = MY902T | Soil in Mingyong Glacier | China | MT908208 | MT889950 | MT921215 | MT921184 |
Cadophora malorum | CBS 165.42 | Amblystoma mexicanum | Netherlands | MH867607 | MH856109 | KM497134 | KM497090 |
Cadophora malorum | CGMCC3.20184 = YL412 | Soil in Yulong Snow Mountain | China | MT908200 | MT889942 | MT921207 | MT921177 |
Cadophora margaritata | CBS 144,084 | Colonized wood | Finland | – | MH203866 | – | – |
Cadophora margaritata | CBS144083T | Colonized wood | Finland | MH267288 | KJ702027 | MH327786 | – |
Cadophora melinii | CBS 268.33T | Probably wood-pulp | Sweden | MH866887 | NR_111150 | KM497132 | KM497088 |
Cadophora melinii | ONC1 | Vitis vinifera 'Cabernet Franc', wood canker | Canada | – | KM497033 | KM497114 | KM497070 |
Cadophora melinii | U11 | Vitis vinifera 'Sangiovese', vascular discoloration | USA | – | KM497032 | KM497113 | KM497069 |
Cadophora meredithiae | CBS143322 = BAG2T | Carex sprengelii, root | Canada | MF979568 | MF979574 | MF677914 | MF979580 |
Cadophora neoregeliae | CBS 146821T | From leaf spots of Neoregelia sp. | New Zealand | MZ064468 | MZ064411 | – | – |
Cadophora novi-eboraci | GLMC 239 | Prunus cerasus, necrotic wood | Germany | – | MN232942 | MN232973 | MN232990 |
Cadophora novi-eboraci | GLMC 273 | Prunus cerasus, necrotic wood | Germany | MT156177 | MN232943 | MN232974 | MN232991 |
Cadophora novi-eboraci | NYC14T | Vitis labruscana, wood canker | USA | – | KM497037 | KM497118 | KM497074 |
Cadophora novi-eboraci | CGMCC3.20190 = YZ1034 | Soil in Yanzigou Glacier | China | MT908213 | MT889955 | MT921220 | MT921189 |
Cadophora novi-eboraci | CGMCC3.20434 = YZ1026 | Soil in Yanzigou Glacier | China | MW793552 | MW793526 | MW818436 | MW810622 |
Cadophora obovata | P1963T | Endophytic in roots of Microthlaspi erraticum | Germany | MN339384 | KT269230 | – | MN325888 |
Cadophora orientoamericana | CTC5 | Vitis hybrid 'Cayuga white', wood canker | USA | – | KM497015 | KM497096 | KM497052 |
Cadophora orientoamericana | MYA-4972 = NHC1T | Vitis vinifera ‘Niagara’ | USA | MF979573 | KM497018 | KM497099 | KM497055 |
Cadophora prunicola | CBS 120891T | Prunus salicina, necrotic wood | South Africa | MT156182 | MN232949 | MN232979 | MN232997 |
Cadophora prunicola | GLMC 276 | Prunus cerasus, necrotic wood | Germany | – | MN232951 | MN232980 | MN232998 |
Cadophora qinghai-tibetana | CGMCC3.20181 = BM327 | Soil in Baima Snow Mountain | China | MT908197 | MT889939 | MT921204 | MT921174 |
Cadophora qinghai-tibetana | CGMCC3.20182 = YL357 | Water in Yulong Snow Mountain | China | MT908198 | MT889940 | MT921205 | MT921175 |
Cadophora qinghai-tibetana | CGMCC3.20183 = BM360 | Soil in Baima Snow Mountain | China | MT908199 | MT889941 | MT921206 | MT921176 |
Cadophora qinghai-tibetana | CGMCC3.20185 = MY474 | Soil in Mingyong Glacier | China | MT908202 | MT889944 | MT921209 | MT921179 |
Cadophora qinghai-tibetana | CGMCC3.20191 = DG1048 | Soil in Dagu Glacier | China | MT908214 | MT889956 | MT921221 | MT921190 |
Cadophora qinghai-tibetana | CGMCC3.20193 = DG1156T | Soil in Dagu Glacier | China | MT908223 | MT889965 | MT921230 | MT921198 |
Cadophora qinghai-tibetana | CGMCC3.20194 = YL414 | Water in Yulong Snow Mountain | China | MT908201 | MT889943 | MT921208 | MT921178 |
Cadophora qinghai-tibetana | CGMCC3.20197 = DG1105 | Soil in Dagu Glacier | China | MT908221 | MT889963 | MT921228 | MT921196 |
Cadophora qinghai-tibetana | CGMCC3.20228 = YL73 | Soil in Yulong Snow Mountain | China | MT908193 | MT889905 | MT921200 | MT898424 |
Cadophora qinghai-tibetana | CGMCC3.20229 = YL319 | Water in Yulong Snow Mountain | China | MT908196 | MT889938 | MT921203 | MT921173 |
Cadophora qinghai-tibetana | CGMCC3.20230 = BM523 | Soil in Baima Snow Mountain | China | MT908203 | MT889945 | MT921210 | MT921180 |
Cadophora qinghai-tibetana | CGMCC3.20231 = MY873 | Soil in Mingyong Glacier | China | MT908207 | MT889949 | MT921214 | MT921183 |
Cadophora qinghai-tibetana | CGMCC3.20232 = DG975 | Soil in Dagu Glacier | China | MT908209 | MT889951 | MT921216 | MT921185 |
Cadophora qinghai-tibetana | CGMCC3.20235 = DG1073 | Soil in Dagu Glacier | China | MT908218 | MT889960 | MT921225 | MT921193 |
Cadophora qinghai-tibetana | CGMCC3.20236 = DG1087 | Soil in Dagu Glacier | China | MT908220 | MT889962 | MT921227 | MT921195 |
Cadophora qinghai-tibetana | CGMCC3.20433 = BM857 | Soil in Baima Snow Mountain | China | MW793551 | MW793525 | MW818439 | MW810621 |
Cadophora qinghai-tibetana | CGMCC3.20435 = YL305 | Water in Yulong Snow Mountain | China | MW793548 | MW793522 | MW818433 | – |
Cadophora qinghai-tibetana | CGMCC3.20436 = BM816 | Soil in Baima Snow Mountain | China | MW793550 | MW793524 | MW818438 | – |
Cadophora qinghai-tibetana | CGMCC3.20437 = HL876 | Soil in Hailuogou Glacier | China | MW793549 | MW793523 | MW818437 | – |
Cadophora qinghai-tibetana | CGMCC3.20847 = MY492 | Soil in Mingyong Glacier | China | OL477358 | OL477352 | OL674145 | OL674148 |
Cadophora qinghai-tibetana | CGMCC3.20848 = MY527 | Soil in Mingyong Glacier | China | OL815016 | OL815013 | OL790381 | OL790384 |
Cadophora qinghai-tibetana | CGMCC3.20849 = MY588 | Soil in Mingyong Glacier | China | OL815017 | OL815014 | OL790382 | OL790385 |
Cadophora qinghai-tibetana | CGMCC3.20850 = MY589 | Soil in Mingyong Glacier | China | OL815018 | OL815015 | OL790383 | OL790386 |
Cadophora ramosa | CBS 111,743 | Actinidia chinensis, vascular discoloration | Italy | – | DQ404351 | KM497136 | KM497091 |
Cadophora ramosa | GLMC 377T | Prunus cerasus, necrotic wood | Germany | MT156187 | MN232956 | MN232984 | MN233002 |
Cadophora rotunda | CBS 146264T | From necrotic tissues from crown of Prunus domestica (Rosaceae) nursery tree | South Africa | – | MN873023 | MN873029 | MN873030 |
Cadophora sabaouae | WAMC117 | Vitis vinifera | Algeria | – | MT524745 | MT646750 | MT646747 |
Cadophora sabaouae | WAMC118 | Vitis vinifera | Algeria | – | MT524744 | MT646751 | MT646748 |
Cadophora sabaouae | WAMC34T | Vitis vinifera | Algeria | – | MT644187 | MT646749 | MT646746 |
Cadophora vinacea | CBS 146263T | From necrotic tissue in trunk of Vitis vinifera cv. Ehrenfelser (Vitaceae) | Canada | – | MN873025 | MN873027 | MN873032 |
Cadophora viticola | Cme-1 | Vitis vinifera 'Syrah', black streaks in shoots | Spain | – | HQ661096 | HQ661096 | HQ661081 |
Cadophora viticola | Cme-2T | Vitis vinifera 'Syrah', black streaks in shoots | Spain | – | HQ661097 | HQ661097 | HQ661082 |
Cadophora vivarii | CBS 146262T | From necrotic tissue of bud union of Malus domestica (Rosaceae) nursery tree | South Africa | – | KY312633 | MN873026 | MN873033 |
Cadophora yulongensis | CGMCC3.20187 = YL814T | Soil sample in Yulong Snow Mountain | China | MT908206 | MT889948 | MT921213 | MT921182 |
Calycina alstrupii | Pz162T | On Lobaria pulmonaria growing on trunk of Alnus incana | Norway | KY305097 | – | – | – |
Calycina marina | TROM F26093 | Dead seaweed (Ascophyllum nodosum) | Norway | KT185670 | – | – | – |
Cenangium acuum | TAAM 198,449 | Pinus sylvestris | Czech Republic | KX090828 | – | – | – |
Cenangium ferruginosum | CBS 556.70 | – | Netherlands | MH871625 | – | – | – |
Chaetomella acutiseta | AFTOL-ID 270 | – | – | AY544679 | – | – | – |
Chaetomella oblonga | CBS 110.78 | Leaf of Acer sp. | Canada | MH872875 | – | – | – |
Chlorociboria aeruginosa | CBS 139.28 | – | – | MH877688 | – | – | – |
Chlorociboria clavula | D1611 | – | New Zealand | JN939941 | – | – | – |
Collembolidpora disimillis | CBS 146372T | Microthlaspi erraticum | Bulgaria | MN339373 | KT269125 | – | MN325878 |
Collembolidpora disimillis | P1924 | Microthlaspi erraticum | Germany | MN339378 | KT269192 | – | MN325882 |
Collembolispora aristata | CPC21145T | Foam in an unnamed right tributary of the brook Bezenek | Czech Republic | KC005811 | NR_111830 | – | KC005818 |
Collembolispora barbata | CBS 115,944 = UMB-088.01T | Mountain freshwater stream | Portugal | – | NR_111443 | – | – |
Cordierites frondosa | HKAS41508 | – | – | AY789354 | – | – | – |
Cordierites guianensis | 192 | – | – | EU107270 | – | – | – |
Cudoniella clavus | AFTOL-ID 166 | – | – | DQ470944 | – | – | – |
Dermea bicolor | CBS 135.46 | – | Canada | MH867659 | – | – | – |
Dermea cerasi | CBS 432.67 | – | – | MH870721 | – | – | – |
Graphium rubrum | CBS 210.34T | – | USA | MH866974 | – | – | – |
Helgardia anguioides | CBS 496.80T | – | Germany | MH873055 | – | – | – |
Helgardia anguioides | RAN45 | – | Germany | – | AY266144 | – | – |
Hyaloscypha finlandica | CBS 444.86T | Pinus sylvestris, root of seedling | Finland | MH873675 | NR_121279 | KM497130 | KM497086 |
Hyaloscypha melinii | CBS 143705T | – | Czech Republic | NG_068558 | – | – | – |
Hyaloscypha vitreola | CBS 126,276 | – | Finland | MH875413 | – | – | – |
Hymenula cerealis | CBS 132.34T | Triticum aestivum, culm | Japan | NG_070839 | NR_171209 | – | – |
Lachnum carneolum | CBS 231.54 | – | France | MH868838 | – | – | – |
Lachnum diminutum | CBS 232.54 | – | France | MH868839 | – | – | – |
Leotia lubrica | KKM 427 | Mycorrhizal root tip | Costa Rica | KF836631 | – | – | – |
Leptodophora echinata | P1518 | Microthlaspi erraticum | Croatia | MN339364 | KT268812 | – | MN325869 |
Leptodophora echinata | P6045T | Endophytic in roots of Microthlaspi perfoliatum | Spain | MN339428 | KT270239 | – | MN325932 |
Leptodophora gamsii | P2440 | Microthlaspi erraticum | France | MN339395 | KT269671 | – | MN325900 |
Leptodophora gamsii | P2437T | Endophytic in roots of Microthlaspi erraticum | France | – | KT269668 | – | MN325899 |
Leptodophora orchidicola | CBS 146,385 | Arabidopsis thaliana | Netherlands | MN365743 | MN365799 | – | MN325937 |
Leptodophora orchidicola | UAMH 8152 | Pedicularis bracteosa, root | Canada | MF979572 | AF214576 | MF677921 | MF979587 |
Leptodophora variabilis | P1176T | Endophytic in roots of Microthlaspi perfoliatum | Croatia | MK539845 | KT268493 | – | MK550890 |
Leptodophora variabilis | P1331 | Microthlaspi perfoliatum | Spain | MK539836 | KT268626 | – | MK550891 |
Mastigosporium album | CPC 22945T | Alopecurus pratensis | Netherlands | KJ710451 | KJ710476 | – | – |
Mastigosporium kitzebergense | CBS 270.69T | – | Germany | MH871040 | MH859306 | – | – |
Mollisia cinerea | CBS 122,029 | Fallen log | USA | MT026558 | – | – | – |
Mollisia cinerella | CBS 312.61 | – | France | MH869631 | MH858062 | – | – |
Mollisia discolor | CBS 289.59 | – | France | MT026504 | – | – | – |
Mollisia fallens | CBS 221.56 | – | Netherlands | MT026505 | – | – | – |
Mycochaetophora gentianae | MAFF 239231T | – | Japan | AB496937 | NR_121201 | – | – |
Mycochaetophora sp. | MAFF 239,284 | – | Japan | AB469680 | AB469681 | – | – |
Neospermospora avenae | CBS 227.38T | Avena sativa | USA | NG_077377 | MW298276 | – | – |
Oculimacula acuformis | CBS 495.80T | Culm base | Germany | MH873054 | MH861289 | – | MG934497 |
Oculimacula aestiva | CBS 114,730 | – | Sweden | – | MG934454 | – | MG934496 |
Oculimacula yallundae | CBS 128.31 | – | France | – | MH855154 | – | MG934499 |
Oculimacula yallundae | CBS 494.80 | Culm base | Germany | – | JF412009 | – | MG934500 |
Phialocephala dimorphospora | CBS 976.72 | – | Germany | MH878299 | – | – | – |
Phialophora dancoi | CBS 329.90T | – | Argentina | MH873899 | MH862214 | – | – |
Pleuroascus nicholsonii | CBS 345.73T | The dung of pack rat | USA | MH872404 | – | – | – |
Porodiplodia livistonae | CPC 32154T | Livistona australis | Australia | NG_069575 | – | – | – |
Porodiplodia vitis | CBS 144634T | Vitis vinifera | USA | MK442552 | – | – | – |
Rhexocercosporidium camporesii | MFLU 17-1594T | Dead stems | Italy | MN688632 | MN688634 | – | – |
Rhexocercosporidium carotae | CBS 418.65T | – | Norway | MH870289 | NR_111086 | – | – |
Rhexocercosporidium microsporum | MFLU 18-2672T | Unknown Apiaceae, stem | UK | MK591966 | MK584939 | – | – |
Rhynchosporium agropyri | H11 | – | – | – | HM627478 | – | HM627463 |
Rhynchosporium commune | H10 | – | – | – | – | HM627437 | HM627462 |
Rhynchosporium commune | H7 | – | – | – | – | HM627434 | HM627459 |
Rhynchosporium orthosporum | 04CH-Bar-A.1.1.3 | Dactylis glomerata | Switzerland | KU844335 | – | – | – |
Rhynchosporium secalis | 02CH4-6a.1 | – | Switzerland | – | KU844333 | – | – |
Rutstroemia bulgarioides | TAAM 198,322 | Fallen cone | Estonia | KX090836 | – | – | – |
Rutstroemia firma | CBS 115.86T | – | Netherlands | MH873619 | – | – | – |
Sclerotinia bulborum | CBS 297.31 | – | USA | MH866668 | – | – | – |
Sclerotinia sclerotiorum | WZ0067 | – | China | AY789347 | – | – | – |
Xylaria hypoxylon | CBS 120.16 | – | – | MH866173 | – | – | – |
Ypsilina buttingtonensis | CPC 39109T | From heartwood of 1000-yr-old Quercus sp. | UK | MT373355 | MT373372 | – | – |
Ypsilina graminea | CBS 114630T | – | UK | MH874529 | NR_160217 | – | – |