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Table 2 Strains of Colletotrichum species used in the phylogenetic analyses with details of host and location, and GenBank accession numbers of the sequences

From: Identification, prevalence and pathogenicity of Colletotrichum species causing anthracnose of Capsicum annuum in Asia

Species Accession No.1 Host/Substrate Country GenBank accession number
ITS gapdh chs-1 his3 act tub2 ApMat gs
Acutatum complex
C.abscissum COAD 1877a Citrus sinensis Brazil KP843126 KP843129 KP843132 KP843138 KP843141 KP843135   
C. acutatum CBS 112996, ATCC 56816, STE-U 5292a Carica papaya Australia JQ005776 JQ948677 JQ005797 JQ005818 JQ005839 JQ005860
  CBS 144.29 Capsicum annuum Sri Lanka JQ948401 JQ948732 JQ949062 JQ949392 JQ949722 JQ950052
C. australisinense CGMCC 3.18886, GX1655a Hevea brasiliensis China MG209623 MG241962 MG241981 MG241947 MG209645   
C. bannaense CGMCC 3.18887, YNWD31a Hevea brasiliensis China MG209638 MG242006 MG241996 MG242002 MG209660   
C. brisbanense CBS 292.67, DPI 11711a Capsicum annuum Australia JQ948291 JQ948621 JQ948952 JQ949282 JQ949612 JQ949942
C. cairnsense BRIP 63642a, CBS 140847a Capsicum annuum Australia KU923672 KU923704 KU923710 KU923722 KU923716 KU923688
C. chrysanthemi CBS 126518, PD 84/520a Carthamus sp., twisted stem Netherlands JQ948271 JQ948601 JQ948932 JQ949262 JQ94992 JQ949922
 C. cosmi CBS 853.73, PD 73/856a Cosmos sp., seed Netherlands JQ948274 JQ948604 JQ948935 JQ949265 JQ949595 JQ949925
C. costaricense CBS 330.75a Coffea arabica, cv. Typica, berry Costa Rica JQ948180 JQ948510 JQ948841 JQ949171 JQ949501 JQ949831   
C. citri CBS 134233a C. aurantifolia shoot China KC293581 KC293741 KC293621 KC293661   
C. cuscutae IMI 304802a Cuscuta sp. Dominica JQ948195 JQ948525 JQ948856 JQ949186 JQ949516 JQ949846   
C. fioriniae CBS 128517a Fiorinia sp. USA JQ948292 JQ948622 JQ948953 JQ949283 JQ949613 JQ949943
C. godetiae CBS 133.44a Clarkia hybrida, cv. Kelvon Glory, seed Denmark JQ948402 JQ948733 JQ949063 JQ949393 JQ949723 JQ950053
C. guajavae IMI 350839, CPC 18893a Psidium guajava, fruit India JQ948270 JQ948600 JQ948931 JQ949261 JQ949591 JQ949921
C. indonesiense CBS 127551, CPC 14986a Eucalyptus sp. Indonesia JQ948288 JQ948618 JQ948949 JQ949279 JQ949609 JQ949939
C. javanense CBS 144963 a , UOM 1115, EWINDO 3 Capsicum annuum Indonesia MH846576 MH846572 MH846573 MH846571 MH846575 MH846574
C. laticiphilum CBS 112989, IMI 383015a Hevea brasiliensis India JQ948289 JQ948619 JQ948950 JQ949280 JQ949610 JQ949940
C. limetticola CBS 114.14a Citrus aurantifolia, young twig USA, Florida JQ948193 JQ948523 JQ948854 JQ949184 JQ949514 JQ949844   
C. lupini CBS 109225, BBA 70884a Lupinus albus Ukraine JQ948155 JQ948485 JQ948816 JQ949146 JQ949476 JQ949806
C. melonis CBS 159.84a Cucumis melo Brazil JQ948194 JQ948524 JQ948855 JQ949185 JQ949515 JQ949845   
C. nymphaeae CBS 515.78a Nymphaea alba, leaf spot Netherlands JQ948197 JQ948527 JQ948858 JQ949518 JQ949848 JQ949848
C. paranaense CBS 134729a, CPC 20901 Malus domestica Brazil KC204992 KC205026 KC205043 KC205004 KC205077 KC205060   
C. paxtonii IMI 165753a, CPC 18868 Musa sp. Saint Lucia JQ948285 JQ948615 JQ948946 JQ949276 JQ949606 JQ949936
C. salicis CBS 607 94a Salix sp., leaf spot Netherlands JQ948460 JQ948791 JQ949121 JQ949451 JQ949781 JQ950111
C. scovillei CBS 120708, HKUCC 10893, Mj6 Capsicum annuum Thailand JQ948269 JQ948599 JQ948930 JQ949260 JQ949590 JQ949920
  CBS 126529, PD 94/921–3, BBA 70349a Capsicum sp. Indonesia JQ948267 JQ948597 JQ948928 JQ949258 JQ949588 JQ949918
  CPC 28551 Capsicum annuum Thailand MH618287 MH618361 MH686337 MH707595 MH645871
  CPC 28552 Capsicum annuum Thailand MH618286 MH618362 MH686338 MH707594 MH645872
  CPC 28577 Capsicum annuum Indonesia MH618295 MH618363 MH686339 MH707593 MH645873
  CPC 28579 Capsicum annuum Indonesia MH618294 MH618364 MH686340 MH707592 MH645874
  CPC 28591 Capsicum annuum Indonesia MH618293 MH618365 MH686341 MH707591 MH645875
  CPC 28593 Capsicum annuum Indonesia MH618292 MH618366 MH686342 MH707590 MH645876
  CPC 28599 Capsicum annuum Indonesia MH618291 MH618367 MH686343 MH707589 MH645877
  CPC 28603 Capsicum annuum Indonesia MH618290 MH618368 MH686344 MH707588 MH645878
  CPC 28615 Capsicum annuum Indonesia MH618289 MH618369 MH686345 MH707587 MH645879
  CPC 28617 Capsicum annuum Indonesia MH618288 MH618370 MH686346 MH707586 MH645880
  CPC 30197, Coll 1 Capsicum annuum Indonesia MH618268 MH618334 MH686347 MH707585 MH645881
  CPC 30198, Coll 2 Capsicum annuum Indonesia MH618269 MH618335 MH686348 MH707584 MH645882
  CPC 30199, Coll 3 Capsicum annuum Indonesia MH618270 MH618336 MH686349 MH707583 MH645883
  CPC 30200, Coll 4 Capsicum annuum Indonesia MH618271 MH618337 MH686350 MH707582 MH645884
  CPC 30201, Coll 5 Capsicum annuum Indonesia MH618272 MH618338 MH686351 MH707581 MH645885
  CPC 30202, Coll 6 Capsicum annuum Indonesia MH618273 MH618339 MH686352 MH707580 MH645886
  CPC 30205, Coll 9 Capsicum annuum Indonesia MH618274 MH618340 MH686353 MH707579 MH645887
  CPC 30206, Coll 10 Capsicum annuum Indonesia MH618275 MH618341 MH686354 MH707578 MH645888
  CPC 30215, Coll 19 Capsicum annuum Indonesia MH618276 MH618342 MH686355 MH707577 MH645889
  CPC 30216, Coll 20 Capsicum annuum Indonesia MH618277 MH618343 MH686356 MH707576 MH645890
  CPC 30217, Coll 21 Capsicum annuum Indonesia MH618278 MH618344 MH686357 MH707575 MH645891
  CPC 30218, Coll 22 Capsicum annuum Indonesia MH618279 MH618345 MH686358 MH707574 MH645892
  CPC 30219, Coll 23 Capsicum annuum Indonesia MH618280 MH618346 MH686359 MH707573 MH645893
  CPC 30220, Coll 24 Capsicum annuum Indonesia MH618281 MH618347 MH686360 MH707572 MH645894
  CPC 30229, Coll 33 Capsicum annuum Thailand MH618282 MH618348 MH686361 MH707571 MH645895
  CPC 30230, Coll 34 Capsicum annuum Thailand MH618283 MH618349 MH686362 MH707570 MH645896
  CPC 30231, Coll 35 Capsicum annuum Thailand MH618284 MH618350 MH686363 MH707569 MH645897
  CPC 30232, Coll 36 Capsicum annuum Thailand MH618285 MH618351 MH686364 MH707568 MH645898
  CPC 30239, Coll 153 Capsicum annuum Taiwan MH618299 MH836634 MH707528 MH707611 MH645855 MH635064
  CPC 30240, Coll 329 Capsicum annuum Taiwan MH618300 MH836635 MH707529 MH707610 MH645856 MH635065
  CPC 30241, Coll 524 Capsicum annuum Taiwan MH618301 MH836637 MH707530 MH707609 MH645857 MH635067
  CPC 30242, Coll 683 Capsicum annuum Taiwan MH618302 MH836638 MH707531 MH707608 MH645858 MH635068
  CPC 30243, Coll 1296 Capsicum annuum Taiwan MH618303 MH836639 MH707532 MH707607 MH645859 MH635069
  CPC 30244, Coll 1297 Capsicum annuum Taiwan MH618304 MH836640 MH707533 MH707606 MH645860 MH635070
  CPC 30246, Coll 1300 Capsicum annuum Taiwan MH618305 MH836641 MH707534 MH707605 MH645861 MH635071
  CPC 30247, Coll 1301 Capsicum annuum Taiwan MH618306 MH836642 MH707535 MH707604 MH645862 MH635072
  CPC 30248, Coll 1302 Capsicum annuum Taiwan MH618308 MH836643 MH707536 MH707603 MH645863 MH635073
  CPC 30249, Coll 1303 Capsicum annuum Taiwan MH618307 MH836644 MH707537 MH707602 MH645864 MH635074
  CPC 30250, Coll 1304 Capsicum annuum Taiwan MH618309 MH836645 MH707538 MH707601 MH645865 MH635075
  CPC 30251, Coll 1306 Capsicum annuum Taiwan MH618310 MH836646 MH707539 MH707600 MH645866 MH635076
  CPC 30252, Coll 141 Capsicum annuum Taiwan MH618311 MH836633 MH707540 MH707599 MH645867 MH635063
  UOM 1101, 313 Capsicum annuum Thailand MH618256 MH618324 MH686324 MH707557 MH635089 MH635049
  UOM 1102, 322 Capsicum annuum Thailand MH618259 MH618325 MH686325 MH707556 MH635090 MH635050
  UOM 1103, 311 Capsicum annuum Thailand MH618255 MH618326 MH686326 MH707555 MH635091 MH635051
  UOM 1104, 314 Capsicum annuum Thailand MH618257 MH618327 MH686327 MH707554 MH635092 MH635052
  UOM 1105, MJ3 Capsicum annuum Thailand MH618264 MH618328 MH686328 MH707553 MH635093 MH635053
  UOM 1106, MJ5 Capsicum annuum Thailand MH618265 MH618329 MH686329 MH707552 MH635094 MH635054
  UOM 1107, MJ7 Capsicum annuum Thailand MH618266 MH618330 MH686330 MH707551 MH635095 MH635055
  UOM 1108, MJ8 Capsicum annuum Thailand MH618267 MH618331 MH686331 MH707550 MH635096 MH635056
  UOM 1109, 211 Capsicum annuum Thailand MH618254 MH618332 MH686332 MH707549 MH635097 MH635057
  UOM 1110, 316 Capsicum annuum Thailand MH618258 MH618333 MH686333 MH707548 MH635098 MH635058
  UOM 1111, GA1 Capsicum annuum Thailand MH618260 MH618357 MH686334 MH707547 MH635099 MH635059
  UOM 1112, GA2 Capsicum annuum Thailand MH618261 MH618358 MH686335 MH707546 MH635100 MH635060
  UOM 1113, GA3 Capsicum annuum Thailand MH618262 MH618359 MH707545 MH635101 MH635061
  UOM 1114, GA5 Capsicum annuum Thailand MH618263 MH618360 MH686336 MH707544 MH635102 MH635062
  UOM 1140, F59 Capsicum annuum Malaysia MH618316 MH618355 MH686322 MH707559 MH635087 MH635047
  UOM 1141, A15 Capsicum annuum Malaysia MH618313 MH618356 MH686323 MH707558 MH635088 MH635048
  UOM 1142, Coll 1307 Capsicum annuum Taiwan MH618298 MH836647 MH707542 MH707597 MH645869 MH635077
  UOM 1143, Coll 1311 Capsicum annuum Taiwan MH618296 MH836648 MH707543 MH707596 MH645870 MH635078
  UOM 1144, EWINDO 2 Capsicum annuum Indonesia MH587232 MH618317 MH686314 MH707567 MH635079 MH836628
  UOM 1145, EWINDO 8 Capsicum annuum Indonesia MH587231 MH618318 MH686315 MH707566 MH635080 MH836629
  UOM 1146, EWINDO 10 Capsicum annuum Indonesia MH587233 MH618319 MH686316 MH707565 MH635081 MH836630
  UOM 1147, EWINDO 14 Capsicum annuum Indonesia MH587234 MH618320 MH686317 MH707564 MH635082 MH836631
  UOM 1148, EWINDO 15 Capsicum annuum Indonesia MH587235 MH618321 MH686318 MH707563 MH635083 MH836632
  UOM 1149, Coll 365 Capsicum annuum Taiwan MH618297 MH836636 MH707541 MH707598 MH645868 MH635066
  UOM 1150, 4–46-3D Capsicum annuum Malaysia MH618312 MH618352 MH686319 MH707562 MH635084 MH635044
  UOM 1151, E15 Capsicum annuum Malaysia MH618314 MH618353 MH686320 MH707561 MH635085 MH635045
  UOM 1152, E16 Capsicum annuum Malaysia MH618315 MH618354 MH686321 MH707560 MH635086 MH635046
C. simmondsii CBS 122122a Carica papaya, fruit Australia JQ948276 JQ948606 JQ948937 JQ949267 JQ949597 JQ949927
C. sloanei IMI 364297, CPC 18929a Theobroma cacao, leaf Malaysia JQ948287 JQ948617 JQ948948 JQ949278 JQ949608 JQ949938
C. tamarilloi CBS 129814, T.A.6a Solanum betaceum, fruit Colombia JQ948184 JQ948514 JQ948845 JQ949175 JQ949505 JQ949835
C. walleri CBS 125472, BMT(HL)19a Coffea sp., leaf tissue Vietnam JQ948275 JQ948605 JQ948936 JQ949266 JQ949596 JQ949926
Boninense complex
C. annellatum CBS 129826a Hevea brasiliensis, leaf Colombia JQ005222 JQ005309 JQ005396 JQ005570 JQ005656
C. beeveri CBS 128527, ICMP 18594a Brachyglottis repanda New Zealand JQ005171 JQ005258 JQ005345 JQ005519 JQ005605
 C. boninense CBS 123755a, MAFF 305972 Crinum asiaticum var. sinicum Japan JQ005153 JQ005240 JQ005327 JQ005501 JQ005588
C. brasiliense CBS 128501a, ICMP 18607, PAS12 Passiflora edulis, fruit anthracnose Brazil JQ005235 JQ005322 JQ005409 JQ005583 JQ005669
C. brassicicola CBS 101059a, LYN 16331 Brassica oleracea var. gemmifera, leaf spot New Zealand JQ005172 JQ005259 JQ005346 JQ005520 JQ005606
C. constrictum CBS 128504a, ICMP 12941 Citrus limon, fruit rot New Zealand JQ005238 JQ005325 JQ005412 JQ005586 JQ005672
C. karsti CAUOS1 Capsicum sp. China KP890103 KP890134 KP890118 KP890126 KP890110
  CAUOS7 Capsicum sp. China KP890108 KP890139 KP890124 KP890132 KP890116
  CBS 125468 Coffea sp., berry tissue Vietman JQ005197 JQ005284 JQ005371 JQ005545 JQ005631
  CBS 127595 Musa banksii Australia JQ005178 JQ005265 JQ005352 JQ005526 JQ005612
  CBS 129815, T.A.7 Solanum betaceum, fruit Colombia JQ005187 JQ005274 JQ005361 JQ005535 JQ005621
  CBS 129834 Musa sp. Mexico JQ005176 JQ005263 JQ005350 JQ005524 JQ005610
  CBS 129927 Anthurium sp. Thailand JQ005206 JQ005293 JQ005380 JQ005554 JQ005640
  CBS 128545, ICMP 18587 Capsicum annuum New Zealand JQ005207 JQ005294 JQ005381 JQ005555 JQ005641
  CBS 128548, ICMP 18589 Solanum lycopersicum New Zealand JQ005205 JQ005292 JQ005379 JQ005553 JQ005639
  CBS 132134, CGMCC 3.14194a Vanda sp. China HM585409 HM585391 HM581995 HM585428
  CPC 28553 Capsicum annuum Indonesia MH844440 MH844444 MH844456 MH844449 MH844448
  CPC 28554 Capsicum annuum Indonesia MH844439 MH844443 MH844455 MH844450 MH844447
  CPC 28601 Capsicum annuum Indonesia MH844438 MH844442 MH844454 MH844451 MH844446
  CPC 28602 Capsicum annuum Indonesia MH844437 MH844441 MH844453 MH844452 MH844445
  GM44 L01a Annona muricata Colombia KC512141 KC506413 KC512162 KC512183 KC512204
C. petchii CBS 378.94a Dracaena marginata Italy JQ005223 JQ005310 JQ005397 JQ005571 JQ005657
C. phyllanthi CBS 175.67a, MACS 271 Phyllanthus acidus India JQ005221 JQ005308 JQ005395 JQ005569 JQ005655
Truncatum complex
C. truncatum CBS 151.35 Phaseolus lunatus USA GU227862 GU228254 GU228352 GU227960 GU228156
Gloeosporioides complex
C. aenigma ICMP 18608a Persea americana Israel JX010244 JX010044 JX009774 JX009443 JX010389 KM360143 JX010078
  ICMP 18686 Pyrus pyrifolia Japan JX010243 JX009913 JX009789 JX009519 JX010390 JX010079
C. aeschynomenes ICMP 17673a, ATCC 201874 Aeschynomene virginica USA JX010176 JX009930 JX009799 JX009483 JX010392 KM360145 JX010081
C. alatae CBS 304.67a, ICMP 17919 Dioscorea alata India JX010190 JX009990 JX009837 JX009471 JX010383 KC888932 JX010065
C. alienum ICMP 12071a Malus domestica New Zealand JX010251 JX010028 JX009882 JX009572 JX010411 KM360144 JX010101
  ICMP 18621 Persea americana New Zealand JX010246 JX009959 JX009755 JX009552 JX010386 JX010075
C. aotearoa ICMP 18537a Coprosma sp. New Zealand JX010205 JX010005 JX009853 JX009564 JX010420 KC888930 JX010113
C. asianum ICMP 18580a, CBS 130418 Coffea arabica Thailand FJ972612 JX010053 JX009867 JX009584 JX010406 FR718814 JX010096
  IMI 313839, ICMP 18696 Mangifera indica Australia JX010192 JX009915 JX009753 JX009576 JX010384 JX010073
C. camelliae CGMCC 3.14925, LC1364a Camellia sinensis China KJ955081 KJ954782 KJ954363 KJ955230 KJ954497 KJ954932
C. changpingense MFLUCC 150022a Fragaria ananassa China KP683152 KP852469 KP852449 KP683093 KP852490
C. chrysophilum CMM 4268a, URM 7362 Musa sp. Brazil KX094252 KX094183 KX094083 KX093982 KX094285
C. clidemiae ICMP 18706a Clidemia hirta USA, Hawaii JX010265 JX009989 JX009877 JX009537 JX010438 KC888929 JX010129
C. conoides CAUG17a Capsicum annuum China KP890168 KP890162 KP890156 KP890144 KP890174
C. cordylinicola MFLUCC 090551a, ICMP 18579 Cordyline fruticosa Thailand JX010226 JX009975 JX009864 HM470235 JX010440 JQ899274 JX010122
C. endophyticum CAUG28 Capsicum annuum China KP145441 KP145413 KP145385 KP145329 KP145469
  DNCL075 Unknown wild fruit Thailand KF242123 KF242181 KF157827 KF254857 KF242154
  LC0324a Pennisetum purpureum Thailand KC633854 KC832854 KF306258
  UOM 1137, F5-2D Capsicum annuum Thailand MH728809 MH707467 MH805853 MH781483 MH846566 MH728828 MH748267
C. fructicola I TCC 6270 Mangifera indica India KC790774 KC888935 KC790663 KC790909 KC790713
  ICMP 18581a, CBS 130416 Coffea arabica Thailand JX010165 JX010033 JX009866 FJ907426 JX010405 JQ807838 JX010095
  LC2923, LF130 Camellia sinensis China KJ955083 KJ954784 KJ954365 KJ955232 KJ954499 KJ954934
  CPC 28644 Capsicum annuum Thailand MH728811 MH707465 MH805851 MH781481 MH846564 MH728830 MH748265
  CPC 28645 Capsicum annuum Thailand MH728810 MH707466 MH805852 MH781482 MH846565 MH728829 MH748266
  UOM 1138, CPC 30253, Coll 853 Capsicum annuum Taiwan MH728817 MH707463 MH805846 MH781476 MH846559 MH728835 MH748260
  UOM 1139, Coll 1318 Capsicum annuum Taiwan MH728808 MH707468 MH805854 MH781484 MH846567 MH728827 MH748268
C. gloeosporioides IMI 356878, ICMP 17821, CBS 112999a Citrus sinensis Italy JX010152 JX010056 JX009818 JX009531 JX010445 JQ807843 JX010085
C. grevilleae CBS 132879, CPC 15481a Grevillea sp. Italy KC297078 KC297010 KC296987 KC296941 KC297102 KC297033
C. grossum CGMCC3.17614, CAUG7a Capsicum sp. China KP890165 KP890159 KP890153 KP890141 KP890171 MG826120
C. hebeiense MFLUCC13 0726a, JZB330028 Vitis vinifera China KF156863 KF377495 KF289008 KF377532 KF288975
C. helleniense CBS 142418a, CPC 26844 Poncirus trifoliata Greece KY856446 KY856270 KY856186 KY856019 KY856528
C. henanense LC3030, CGMCC 3.17354a Camellia sinensis China KJ955109 KJ954810 KM023257 KJ955257 KJ954524 KJ954960
C. horii ICMP 10492, MTCC 10841a Diospyros kaki Japan GQ329690 GQ329681 JX009752 JX009438 JX010450 JQ807840 JX010137
C. hystricis CBS 142411a, CPC 28153 Citrus hystrix Italy KY856450 KY856274 KY856190 KY856023 KY856532
C. jiangxiense CGMCC 3.17363a Camellia sinensis China KJ955201 KJ954902   KJ954471 KJ955348 KJ954607 KJ955051
C. kahawae subsp. kahawae IMI 319418, ICMP 17816a Coffea arabica Kenya JX010231 JX010012 JX009813 JX009452 JX010444 JQ894579 JX010130
C. makassarense CPC 28555 Capsicum annuum Indonesia MH728816 MH728822 MH805847 MH781477 MH846560 MH728834 MH748261
  CPC 28556 Capsicum annuum Indonesia MH728815 MH728821 MH805848 MH781478 MH846561 MH728833 MH748262
  CBS 143664 a , CPC 28612 Capsicum annuum Indonesia MH728812 MH728820 MH805850 MH781480 MH846563 MH728831 MH748264
C. musae CBS 116870, ICMP 19119, MTCC 11349a Musa sp. USA JX010146 JX010050 JX009896 JX009433 HQ596280 KC888926 JX010103
  CMM 4458 Musa sp. Brazil KX094249 KX094191 KX094080   KX093967 KX094292
C. nupharicola CBS 469.96, ICMP 17938 Nuphar lutea subsp. polysepala USA JX010189 JX009936 JX009834 JX009486 JX010397 JX010087
  CBS 470.96, ICMP 18187a Nuphar lutea subsp. polysepala USA JX010187 JX009972 JX009835 JX009437 JX010398 JX145319 JX010088
C. perseae GA100a Persea americana Israel KX620308 KX620242   KX620145 KX620341 KX620177 KX620275
C. proteae CBS 132882a Proteaceae South Africa KC297079 KC297009 KC296986   KC296940 KC297101   
C. psidii CBS 145.29, ICMP 19120a Psidium sp. Italy JX010219 JX009967 JX009901 JX009515 JX010443 KC888931 JX010133
C. queenslandicum ICMP 1778a Carica papaya Australia JX010276 JX009934 JX009899 JX009447 JX010414 KC888928 JX010104
  ICMP 18705 Coffea sp. Fiji JX010185 JX010036 JX009890 JX009490 JX010412   JX010102
  BRIP 63695 Capsicum annuum Australia        KU923727 KU923737
C. salsolae CBS 119296, ICMP 18693 Glycine max (inoculated) Hungary JX010241 JX009917 JX009791 JX009559
  ICMP 19051a Salsola tragus Hungary JX010242 JX009916 JX009863 JX009562 JX010403 KC888925 JX010093
C. siamense CPC 28609 Capsicum annuum Indonesia MH728813 MH713886 MH748242
  CPC 30209, UOM 13 Capsicum annuum Indonesia MH707471 MH707452 MH805834 MH781464 MH846547 MH713897 MH748231
  CPC 30210, UOM 14 Capsicum annuum Indonesia MH707472 MH707453 MH805835 MH781465 MH846548 MH713896 MH748232
  CPC 30211, UOM15 Capsicum annuum Indonesia MH707473 MH707454 MH805836 MH781466 MH846549 MH713895 MH748233
  CPC 30212, UOM 16 Capsicum annuum Indonesia MH707474 MH707455 MH805837 MH781467 MH846550 MH713894 MH748234
  CPC 30221, UOM 25 Capsicum annuum Thailand MH707475 MH707456 MH805838 MH781468 MH846551 MH713893 MH748235
  CPC 30222, UOM26 Capsicum annuum Thailand MH707476 MH707457 MH805839 MH781469 MH846552 MH713892 MH748236
  CPC 30223, UOM27 Capsicum annuum Thailand MH707477 MH707458 MH805840 MH781470 MH846553 MH713891 MH748237
  CPC 30233, UOM37 Capsicum annuum Indonesia MH707478 MH707459 MH805841 MH781471 MH846554 MH713890 MH748238
  CPC 30234, UOM38 Capsicum annuum Indonesia MH707479 MH707460 MH805842 MH781472 MH846555 MH713889 MH748239
  CPC 30235, UOM39 Capsicum annuum Indonesia MH707480 MH707461 MH805843 MH781473 MH846556 MH713888 MH748240
  CPC 30236, UOM40 Capsicum annuum Indonesia MH707481 MH707462 MH805844 MH781474 MH846557 MH713887 MH748241
  UOM 1116 Capsicum annuum Sri Lanka MH707495 MH713872 MH748256
  UOM 1117 Capsicum annuum Sri Lanka MH707496 MH713871 MH748257
  UOM 1118 Capsicum annuum Sri Lanka MH707497 MH713870 MH748258
  UOM 1124, F1-3A Capsicum annuum Thailand MH707482 MH713885 MH748243
  UOM 1125, F7-3B Capsicum annuum Thailand MH707488 MH713879 MH748249
  UOM 1126, F4-1C Capsicum annuum Thailand MH707484 MH713883 MH748245
  UOM 1127, F5-1A Capsicum annuum Thailand MH707485 MH713882 MH748246
  UOM 1128, F7-1B Capsicum annuum Thailand MH707487 MH713880 MH748248
  UOM 1129, F5-4A Capsicum annuum Thailand MH707486 MH713881 MH748247
  UOM 1130, F1-3C Capsicum annuum Thailand MH707483 MH713884 MH748244
  UOM 1131, F7-4A Capsicum annuum Thailand MH707489 MH713878 MH748250
  UOM 1132, RC1 Capsicum annuum Thailand MH707490 MH713877 MH748251
  UOM 1133, RC2 Capsicum annuum Thailand MH707491 MH713876 MH748252
  UOM 1134, RC3 Capsicum annuum Thailand MH707492 MH713875 MH748253
  UOM 1135, RC4 Capsicum annuum Thailand MH707493 MH713874 MH748254
  UOM 1136, RC5 Capsicum annuum Thailand MH707494 MH713873 MH748255
  IMI 82267, CPC 16808 Vitis sp. Brazil        KP703783 KP703698
  ICMP 18575,HKUCC 10884 Capsicum annuum Thailand JX010256 JX010059 JX009785 JX009455 JX010404 KP703769 JX010094
  ICMP 18578a, CBS 130417 Coffea arabica Thailand JX010171 JX009924 JX009865   FJ907423 JX010404   JX010094
  LC0144, PE004–1 Coffea sp. China, Yunnan        KP703785 KP703700
  LC0148, PE007–1 Camellia sp. China, Yunnan        KJ954494 KJ954929
C. siamense (syn. C. communis) NK24, MTCC 11599 Mangifera indica India        JQ894582  
C. siamense (syn. C. endomangiferae) CMM 3814a Mangifera indica Brazil KC702994 KC702955 KC598113   KC702922 KM404170 KJ155453  
C. siamense (syn. C. dianesei) CMM 4083 Mangifera indica Brazil        KX094304 KX094216
  CMM 4085a Mangifera indica Brazil        KX094306 KX094218
C. siamense (syn. C. hymenocallidis) CBS 125378, ICMP 18642, LC0043a Hymenocallis americana China JX010278 JX010019 GQ856730 JX009441 JX010410 JQ899283 JX010100
  CBS 112983, CPC 2291 Protea cynaroides Zimbabwe KC297065 KC297007 KC296984 KC296929 KC297100 KP703761 KC297030
  CBS 113199. CPC 2290 Protea cynaroides Zimbabwe KC297066 KC297008 KC296985 KC296930 KC297090 KP703763 KC297031
  CBS 116868 Musa sp. India; Southern India KC566815 KC566669 KC566382 KC566961 KP703429 KP703764 KP703679
C. siamense (syn. C. jasmini-sambac) CBS 130420a, ICMP 19118 Jasminum sambac Vietnam HM131511 HM131497 JX009895 HM131507 JX010415 JQ807841 JX010105
  CPC 16135, WTS9 Persea americana South Africa KP703760 KP703678 KC566375 KC566954 KP703597 KP703845 KP703760
C. siamense (syn. C. melanocaulon) CBS 133251, coll131, BPI 884113a Vaccinium macrocarpon USA JX145313 KP703685
C. siamense (syn. C. murrayae) CBS 133239, GZAAS5.09506a Murraya sp. China KP703770 JQ247621
C. syzygicola DNCL021 MFLUCC 100624 Syzygium samarangense Thailand KF242094 KF242156 KF157801 KF254880
C. tainanense CBS 143666 a , CPC 30245, UOM 1120, Coll 1298 Capsicum annuum Taiwan MH728818 MH728823 MH805845 MH781475 MH846558 MH728836 MH748259
  UOM 1119, Coll 1290 Capsicum annuum Taiwan MH728805 MH728819 MH805857 MH781487 MH846570 MH728824 MH748271
C. theobromicola MTCC 11350, CBS 124945, ICMP 18649a Theobroma cacao Panama JX010294 JX010006 JX009869 JX009444 JX010447 KC790726 JX010139
C. ti ICMP 4832a Cordyline sp. New Zealand JX010269 JX009952 JX009520 JX010442 KM360146 JX010123
C. tropicale CBS 124943, ICMP 18651 Annona muricata Panama JX010277 JX010014 JX009868 JX009570 KC790728
  CBS 124946 Unknown Brazil KC566806 KC566660 KC566373 KC566952 KC566228
  CBS 124949, ICMP 18653, MTCC 11371a Theobroma cacao Panama JX010264 JX010007 JX009870 JX009489 JX010407 KC790728 JX010097
  CMM 4071 Mangifera indica Brazil KC329785 KC517181 KC533726 KC517258
  CMM 4243 Musa sp. Brazil KU213603 KU213601 KU213600 KU213596 KU213604
  CPC 16260 Unknown Brazil KC566807 KC566661 KC566374 KC566953 KC566229
  GM04-L01 Annona muricata Colombia KC512125 KC506397 KC512146 KC512167 KC512188
  GM33-L01 Annona muricata Colombia KC512128 KC506400 KC512149 KC512170 KC512191
  CPC 28607 Capsicum annuum Indonesia MH728814 MH707464 MH805849 MH781479 MH846562 MH728832 MH748263
  UOM 1002 Capsicum annuum Indonesia MH728807 MH707469 MH805855 MH781485 MH846568 MH728826 MH748269
  UOM 1003 Capsicum annuum Indonesia MH728806 MH707470 MH805856 MH781486 MH846569 MH728825 MH748270
C. viniferum GZAAS 5.08601a Vitis vinifera China JN412804 JN412798 JN412795 JN412813 JN412787
  CAUG27 Capsicum sp. China KP145440 KP145412 KP145356 KP145384 KP145468
C. wuxiense CGMCC 3.17894a Camellia sinensis China KU251591 KU252045 KU251939 KU251672 KU252200 KU251722 KU252101
C. xanthorrhoeae BRIP 45094, ICMP 17903, CBS 127831a Xanthorrhoea preissii Australia JX010261 JX009927 JX009823 JX009478 JX010448 KC790689 JX010138
Orchidearum complex
C. cattleyicola CBS 170.49a Cattleya sp. Belgium MG600758 MG600819 MG600963 MG601025   
C. cliviicola CBS 125375a Clivia miniata China MG600733 MG600795 MG600939 MG601000
  CSSK4 Clivia miniata China GQ485607 GQ856756 GQ856777 GQ849440
  CSSS1 Clivia miniata China GU109479 GU085868 GU085861 GU085869
  CSSS2 Clivia miniata China GU109480 GU085868 GU085862 GU085870
C. dracaenophilum CBS 118199a Dracaena sanderana China JX519222 JX546707 JX519238 JX519247
C. musicola CBS 132885a Musa sp. Mexico MG600736 MG600798 MG600942 MG601003
C. orchidearum CBS 135131a Dendrobium nobile Netherlands MG600738 MG600800 MG600944 MG601005
 C. piperis IMI 71397, CPC 21195a Piper nigrum Malaysia MG600760 MG600820 MG600964 MG601027   
C. plurivorum CBS 125474a Coffea sp. Vietnam MG600718 MG600781 MG600925 MG600985
  CBS 132443 Coffea sp. Vietnam MG600717 MG600780 MG600924 MG600984
  CMM 3742 Mangifera indica Brazil KC702980 KC702941 KC702908 KC992327
  CMM 3746 Mangifera indica Brazil KC702981 KC702942 KC702909 KC992328
  CORCG2 Cymbidium
China HM585397 HM585380 HM581985 HM585422
  CPC 28638 Capsicum annuum, leaf Thailand MH805810 MH805816 MH805828 MH805824
  CPC 28639 Capsicum annuum, leaf Thailand MH805811 MH805817 MH805829 MH805825
  LJTJ 16 Capsicum annuum China KP748207 KP823786 KP823739 KP823851
  LJTJ 22 Capsicum annuum China KP748213 KP823792 KP823740 KP823852
  LJTJ 30 Capsicum annuum China KP748221 KP823800 KP823741 KP823853
  UOM 1004 Capsicum annuum Thailand MH805812 MH805818 MH805830 MH805824
  UOM 1005 Capsicum annuum Thailand MH805813 MH805819 MH805831 MH805825
  UOM 1006 Capsicum annuum Thailand MH805814 MH805820 MH805832 MH805826
  UOM 1153, M2 Capsicum annuum Malayasia MH805815 MH805821 MH805827
C. sojae CAUOS5 Capsicum sp. China KP890107 KP890138 KP890114
  ATCC 62257a Glycine max USA MG600749 MG600810 MG600954 MG601016
C. vittalense CBS 181.82a Theobroma cacao India MG600734 MG600796 MG600940 MG601001
  1. 1ATCC American Type Culture Collection, BBA Culture collection of the Biologische Bundesanstalt fur Land- und Forstwirtschaft, Berlin, Germany, BRIP Queensland Plant Pathology Herbarium, Australia, CPC Culture collection of P.W. Crous, housed at Westerdijk Fungal Biodiversity Institute, CBS Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands, CGMCC China, General Microbiological Culture Collection, Beijing, China, DPI Department of Primary Industries, HKUCC The University of Hong Kong Culture Collection, Hong Kong, China, ICMP International Collection of Microorganisms from Plants, Landcare Research, Auckland, New Zealand, IMI Culture collection of CABI Europe UK Centre, Egham, UK, LC Working collection of Lei Cai, housed at CAS, China, LF Working collection of Fang Liu, housed at CAS, China, MFLUCC Mae Fah Luang University Culture Collection, ChiangRai, Thailand, NBRC NITE Biological Resource Center, Chiba, Japan, PD Plantenziektenkundige Dienst Wageningen, Netherlands, UOM University of Melbourne culture collection, Victoria, Australia, ZJUD Diaporthe strains in Zhejiang University, China. Cultures indicated with an asterisk (a) are ex-type cultures
  2. Isolates and accession numbers in bold represents the isolates used in this study