Table 3 Other sequences retrieved from GenBank for phylogenetic analysis

Acarospora cervina

AY640941

AY640982

–

AY641021

Acarospora laqueata

AY640943

AY640984

–

AY641024

Acrospermum adeanum

EU940104

EU940031

–

EU940320

Acro. compressum

EU940084

EU940012

–

EU940301

Acro. gramineum

EU940085

EU940013

–

EU940302

Aigialus grandis

GU301793

GU296131

–

GU371762

Aigialus parvus

GU301795

GU296133

GU349064

GU371771

Aliquandostipite khaoyaiensis

GU301796

AF201453

GU349048

FJ238360

Anisomeridium ubianum

GU327709

JN887379

–

–

Apiosporina collinsii

GU301798

GU296135

GU349057

–

Armillaria mellea

AY700194

AY787217

AY881023

AY780938

Aquasubmersa japonica

LC061588

LC061583

LC194385

LC194422

Arthopyrenia salicis

AY538339

AY538333

–

–

Ascocratera manglicola

GU301799

GU296136

–

GU371763

Asterina cestricola

GU586215

GU586209

–

–

As. fuchsiae

GU586216

GU586210

–

–

As. phenacis

GU586217

GU586211

–

–

As. weinmanniae

GU586218

GU586212

–

–

As. zanthoxyli

GU586219

GU586213

–

–

Aureobasidium pullulans

DQ470956

DQ471004

DQ471075

DQ470906

Botryobambusa fusicoccum

JX646809

JX646826

–

–

Botryosphaeria agaves

JX646808

JX646825

–

–

Botryosphaeria dothidea

DQ678051

DQ677998

DQ767637

DQ677944

Calocera cornea

AY701526

AY771610

AY881019

AY536286

Cladonia caroliniana

AY584640

AY584664

DQ782888

AY584684

Cladonia stipitata

DQ973026

DQ973003

–

DQ973087

Coccocarpia erythroxyli

DQ883800

DQ883791

DQ883775

DQ883756

Delitschia didyma

DQ384090

AF242264

–

–

Delitschia winteri

DQ678077

DQ678026

DQ677922

DQ677975

Dendrographa decolorans

AY548815

AY548809

DQ883725

Dothidea hippophaeos

DQ678048

U42475

DQ677887

DQ677942

D. insculpta

DQ247802

DQ247810

DQ471081

AF107800

D. sambuci

AY544681

AY544722

DQ497606

KT216559

Dothiora cannabinae

DQ470984

DQ479933

DQ471107

DQ470936

Dyfrolomyces rhizophorae

GU479799

GU479766

GU479860

–

Dyfrolomyces tiomanensis

KC692156

KC692155

KC692157

–

Elsino centrolobi

DQ678094

DQ678041

DQ677934

–

E. phaseoli

DQ678095

DQ678042

DQ677935

–

E. veneta

DQ767658

DQ767651

DQ767641

–

Falciformispora lignatilis

GU371826

GU371834

GU371819

–

Fal. senegalensis

KF015627

KF015634

KF015688

KF015716

Fal. tompkinsii

KF015625

KF015640

KF015685

KF015718

Flavoparmelia caperata

AY584639

AY584663

DQ883763

AY584685

Fomitopsis pinicola

AY684164

AY705967

AY885152

AY786056

Gibbera conferta

GU301814

GU296150

GU349041

–

Gloniopsis praelonga

FJ161195

FJ161154

FJ161103

FJ161113

Glonium circumserpens

FJ161200

FJ161160

FJ161108

FJ161126

Glonium stellatum

FJ161179

FJ161140

FJ161095

–

Guignardia gaultheriae

DQ678089

–

–

Heterodermia vulgaris

KX512857

DQ883789

DQ883773

DQ883754

Hysteropatella clavispora

AY541493

DQ678006

DQ677901

DQ677955

Jahnula aquatica

EF175655

EF175633

–

–

J. bipileata

EF175657

EF175635

–

–

Kirschsteiniothelia aethiops

AY016361

AY016344

DQ677884

DQ470914

Kirschsteiniothelia lignicola

HQ441568

HQ441569

–

–

Lecanactis abietina

AY548812

AY548805

–

Lecanora contractula

DQ986746

DQ986741

–

DQ992428

Lepidosphaeria nicotiae

DQ678067

–

DQ677910

DQ677963

Lichenoconium aeruginosum

HQ174269

–

–

–

L. erodens

HQ174267

–

–

–

L. lecanorae

HQ174263

–

–

–

L. usneae

HQ174265

–

–

–

Lichenothelia calcarea

KC015061

KC015081

–

–

Lichenothelia convexa

KC015068

KC015083

–

–

Lindgomyces breviappendiculata

AB521748

AB521733

–

–

Lindgomyces ingoldianus

AB521736

AB521719

–

–

Lobariella pallida

DQ883797

DQ883788

DQ883772

DQ883753

Lophiotrema neoarundinaria

AB524596

AB524455

AB539110

AB539097

Macrophomina phaseolina

DQ678088

DQ678037

DQ677929

KX463996

Massariosphaeria grandispora

GU301842

GU296172

GU349036

GU371725

Massariosphaeria typhicola

GU301844

GU296174

–

GU371795

Megalotremis verrucosa

GU327718

JN887383

–

–

Microthyrium microscopicum

GU301846

GU296175

GU349042

GU371734

Microxyphium aciculiforme

GU301847

GU296176

GU349045

GU371736

Microxyphium theae

GU301849

GU296178

GU349060

–

Myelochroa aurulenta

EF042917

DQ973001

–

DQ973070

Myriangium duriaei

DQ678059

AY016347

DQ677900

DQ677954

Myriangium hispanicum

GU301854

GU296180

GU349055

GU371744

Mytilinidion resinicola

FJ161185

FJ161145

–

–

Mytilinidion scolecosporum

FJ161186

FJ161146

FJ161102

FJ161121

Natipusilla bellaspora

JX474863

JX474868

–

–

N. decorospora

HM196369

HM196376

–

–

N. limonensis

HM196370

HM196377

–

–

N. naponensis

HM196372

HM196379

–

–

Neofusicoccum parvum

AY928045

EU673151

–

FJ900618

Neofusicoccum ribis

DQ678053

DQ678000

DQ677893

EU339554

Oedohysterium insidens

GQ221882

GU323190

–

GU371785

Ophiosphaerella sasicola

AB524599

AB524458

AB539111

AB539098

Parmotrema austrosinense

DQ912338

DQ912315

–

DQ912386

Peltigera degenii

KX869856

AY584681

DQ782897

–

Phaeotrichum benjaminii

AY004340

AY016348

DQ677892

DQ677946

Phyllosticta citricarpa

GU301815

GU296151

GU349053

Physconia muscigena

DQ912344

DQ912321

–

DQ912393

Platismatia glauca

KJ766626

KJ766768

–

DQ912388

Pleopsidium chlorophanum

DQ842017

DQ525541

DQ782920

DQ525442

Pleopsidium gobiense

DQ883698

DQ525573

DQ883804

DQ525452

Protoparmeliopsis muralis

KJ766634

–

–

KU935052

Pseudotetraploa curviappendiculata

AB524608

AB524467

–

–

Rasutoria tsugae

EF114705

EF114730

–

–

Roccella fuciformis

AY584654

AY584678

–

Roccella montagnei

GU138014

AF110341

–

Roussoella hysterioides

AB524622

AB524481

AB539115

AB539102

Roussoella pustulans

AB524623

AB524482

AB539116

AB539103

Sydowia polyspora

DQ678058

DQ678005

DQ677899

DQ677953

Trichodelitschia bisporula

GU348996

GU349000

GU349020

GU371802

Trichodelitschia munkii

DQ384096

DQ384070

–

–

Triplosphaeria maxima

AB524637

AB524496

–

–

Ulospora bilgramii

DQ678076

DQ678025

DQ677921

DQ677974

Umbilicaria papulosa

DQ883691

DQ883701

DQ883727

DQ883708

Umbilicaria pustulata

AY300839

DQ883700

DQ883726

DQ883707

Umbilicaria spodochroa

DQ986773

DQ986707

–

KY972682

Usnea strigosa

DQ973033

DQ973008

–

DQ973095

Venturia inaequalis

GU301878

GU296204

GU349023

–

Vulpicida pinastri

DQ923675

DQ912318

–

DQ912390

Westerdykella cylindrica

AY004343

AY016355

DQ497610

–

Westerdykella ornata

GU301880

GU296208

GU349021

GU371803