Table 1 General features of the genome of Physcia stellaris
From: IMA Genome - F13
Assembly statistics | Physcia stellaris 10–5 |
|---|---|
Assembly size (Mb) | 46.57 |
Scaffolds | 184 |
Contigs | 196 |
Scaffold N50 (Kb) | 594.86 |
Contig N50 (Kb) | 586.07 |
Mean Coverage by Nanopore (fold) | 31.16 |
Mean Coverage by Illumina (fold) | 30.25 |
BUSCO coverage (%) | 95.6 |
G + C content (%) | 43.32 |
Gene prediciton statistics | |
 Predicted gene models | 10,522 |
 Average gene length (bp) | 1760.35 |
 Gene density (genes per Mb) | 225.94 |
 Predicted introns | 24,441 |
 Introns per gene | 2.32 |
Secondary metabolites (SM) statistics | |
 Total SM clusters | 74 |
 Type I polyketide synthetases (PKSs) | 20 |
 Type III PKSs | 1 |
 Nonribosomal peptide synthetases (NRPSs) | 15 |
 NRPS-like fragments | 16 |
 Terpene clusters | 17 |
 Indole clusters | 4 |
 fungal-RiPP | 1 |