Table 3 Lineages of unnamed and/or collective polypore species in Estonia. Freq – no. of records in Estonia (* 1; ** 2–5; *** > 5)
From: Polypore fungi as a flagship group to indicate changes in biodiversity – a test case from Estonia
Vouchers from Estonia | Best match from outside Estonia | |||||||
|---|---|---|---|---|---|---|---|---|
Taxon | Lineage | Voucher ID | UNITE SH code at 1.5% threshold level | Similarity % (no. of variable/total sites) | Annotation | GenBank no. | Similarity to voucher % (no. of variable/total sites) | Freq. |
Antrodiella faginea | L1 | TU130324 | SH1600328.08FU | 99% (6/549 BP) | A. faginea (CZ) | AF126885 | 100% (0/549 BP) | *** |
L2 | TU130481 | SH1600328.08FU | A. faginea (RU) | KU726586 | 100% (0/547 BP) | *** | ||
Byssoporia terrestris | L1 | TU130505 | SH1542891.08FU | 79% (124/583 BP) | B. terrestris (FI) | UDB031621 | 99% (2/576 BP) | * |
L2 | TU130449 | SH1629432.08FU | B. terrestris (SE) | EU118608 | 83% (101/587 BP) | ** | ||
Ceriporia excelsa | L1 (s. typi) | TU115577 | SH2141340.08FU | 98% (15/909 BP) | C. excelsa (US) | MH858306 | 100% (0/598 BP) | *** |
L2 | TU124431 | SH1510726.08FU | Ceriporia sp. (US) | KP135050 | 99% (2/598 BP) | * | ||
Ceriporia viridans | L1 (s. typi) | TU130515 | SH1510720.08FU | 97% (27/902 BP) | C. viridans s str. (FI) | KX236481 | 99% (4/549 BP) | *** |
L2 | TU130057 | SH1510723.08FU | C. viridans s str. (FI) | KX236481 | 97% (23/549 BP) | *** | ||
Ceriporiopsis pseudogilvescens | L1 (s. typi) | TU122449 | SH1543621.08FU | 99% (2/597 BP) | C. pseudo-gilvescens (CN) | KU509523 | 100% (0/597 BP) | *** |
L2 | TU129148 | SH1543621.08FU | C. resinascens (SK) | FJ496679 | 99% (2/597) | ** | ||
Coltricia cinnamomea | L1 | TU110786 | SH1651067.08FU | 76–99% (8–151/574 BP) | C. cinnamomea (CN) | KY693732 | 88% (72/584 BP) | ** |
L2 | TU113488 | SH1651067.08FU | C. cinnamomea (CN) | KY693732 | 87% (73/580 BP) | ** | ||
L3 | TU106861 | SH1611633.08FU | Coltricia sp. (MX) | MG966155 | 98% (12/595 BP) | * | ||
L4 | TAAM196949 | SH1651068.08FU | C. cinnamomea (CN) | KY693729 | 90% (63/608 BP) | * | ||
Coltricia perennis | L1 | TU106858 | SH1554196.08FU | 86–99% (8–76/553 BP) | C. perennis (US?) | DQ234560 | 99% (8/541 BP) | * |
L2 | TU110835 | SH1554196.08FU | C. perennis (US?) | DQ234560 | 100% (0/538 BP) | * | ||
L3 | TU106860 | SH1554198.08FU | C. perennis (FI) | MF319057 | 99% (2/543 BP) | ** | ||
Physisporinus sanguinolentus | L1 | TU122889 | SH1558568.08FU | 97% (19/543 BP) | P. furcatus (RU) | KY131853 | 98% (12/532 BP) | ** |
L2 | TU129782 | P. furcatus (CN) | KY131856 | 99% (5/536 BP) | * | |||
Physisporinus vitreus | L1 | TU130068 | SH1615294.08FU | 94–99% (2–27/464 BP) | P. sanguinolentus (SE) | JX109843 | 99% (5/541 BP) | *** |
L2 | TU129958 | SH1615294.08FU | P. sanguinolentus (SE) | JX109843 | 99% (4/541 BP) | ** | ||
L3 | TU130572 | SH1615294.08FU | P. sanguinolentus (SE) | JX109843 | 99% (1/463 BP) | ** | ||
L4 | TU122877 | SH1615296.08FU | P. sanguinolentus (SK) | FJ496671 | 100% (1/539 BP) | ** | ||
Sidera spp. | L1 (annual) | TU122801 | SH1544622.08FU | 80–86%% (90–176/871 BP) | Sidera sp. (US) | KP814157 | 97% (15/597 BP) | ** |
L2 (annual) | TU129576 | SH1612214.08FU | Schizopora sp. (US) | MF161274 | 99% (4/587 BP) | *** | ||
L3 (perennial) | TU122545 | SH1540362.08FU | Sidera vulgaris (AU) | FN907922 | 96% (12/280 BP) | *** | ||
Sistotrema alboluteum | L1 | TU121700 | SH1506830.08FU | 95% (28/538 BP) | S. aff. alboluteum (US) | KP814533 | 94% (30/538 BP) | ** |
L2 | TU130503 | SH1506832.08FU | S. aff. alboluteum (US) | KP814533 | 99% (2/534 BP) | * | ||
Sistotrema muscicola | L1 | TU130567 | SH1539308.08FU | Sistotrema sp. (US) | KP814242 | 91% (48/533 BP) | ** | |
L2 | TAAM180781 | SH1506835.08FU | 85–94% (30–72/530 BP) | S. muscicola (FI) | AJ606040 | 99% (1/475 BP) | * | |
L3 | TAAM202939 | SH1539286.08FU | Sistotrema sp. (US) | KP814241 | 91% (51/537 BP) | ** | ||
L4 | TU130466 | SH1539297.08FU | Sistotrema sp. (US) | KP814241 | 91% (47/525 BP) | * | ||
Skeletocutis sp. (kuehneri group) | TU128024 | SH1541633.08FU | Skeletocutis chrysella (FI) | FN907916 | 95% (28/583 BP) | * | ||