From: IMA Genome - F15
Assembly | Flye | Canu |
---|---|---|
Assembly size (Mb) | 50.57 | 51.63 |
Contigs | 52 | 111 |
Contig N50 (Kb) | 1267 | 972 |
Mean Coverage by Nanopore (fold) | 22 | 22 |
Mean Coverage by Illumina (fold) | 21 | 21 |
G + C content (%) | 37.96 | 37.65 |
BUSCO completeness | C:96.0%[S:95.8%,D:0.2%],F:0.5%,M:3.5% | Â |
Gene prediction | Â | Â |
Predicted gene models | 9355 | Â |
Average gene length (bp) | 1586.97 | Â |
Gene density (genes per Mb) | 184.99 | Â |
Predicted introns | 17 778 | Â |
Introns per gene | 1.9 | Â |
Secondary metabolites | Â | Â |
Total SM clusters | 44 | Â |
Type I polyketide synthetases (PKSs) | 30 | Â |
Type III PKSs | 1 | Â |
Nonribosomal peptide synthetases (NRPSs) | 7 | Â |
NRPS-like fragments | 4 | Â |
Terpene clusters | 5 | Â |