Comparative genomics reveals low levels of inter- and intraspecies diversity in the causal agents of dwarf and common bunt of wheat and hint at conspecificity of Tilletia caries and T. laevis

Sedaghatjoo, Somayyeh; Mishra, Bagdevi; Forster, Monika K.; Becker, Yvonne; Keilwagen, Jens; Killermann, Berta; Thines, Marco; Karlovsky, Petr; Maier, Wolfgang

doi:10.1186/s43008-022-00098-y

Table 1 List of the Tilletia isolates used for genome comparison

From: Comparative genomics reveals low levels of inter- and intraspecies diversity in the causal agents of dwarf and common bunt of wheat and hint at conspecificity of Tilletia caries and T. laevis

Taxon	Isolate (Accession number^a)	Collection year	Geographical origin	Host	BioProject accession	Sequencing technology	References
T. caries	AA11 (CBS 144825)	2015	Austria	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study
T. caries	AI (CBS 145171)	2015	Italy	Triticum durum	PRJEB40624	Illumina HiSeq 4000	This study
T. caries	AO (CBS 145172)	2014	Germany	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study
T. caries	AZH3 (CBS 145166)	2015	Switzerland	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study
T. caries	DAOMC 238032	1996	USA	Triticum sp.	PRJNA317434	Illumina HiSeq	Nguyen et al. (2019)
T. controversa	DAOMC 236426	1998	Canada	Triticum sp.	PRJNA317433	Illumina HiSeq, MiSeq, PacBio	Nguyen et al. (2019)
T. controversa	DAOMC 238052	1997	Canada	Triticum sp.	PRJNA393324	Illumina MiSeq	Nguyen et al. (2019)
T. controversa	OA2 (CBS 145169)	2015	Austria	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study
T. controversa	OL14 (CBS 145167)	2014	Germany	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study
T. controversa	OR (CBS 144827)	2013	Germany	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000, PacBio RS II	This study
T. controversa	OV (CBS 145170)	2011	Germany	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study
T. controversa	OW (CBS 145168)	2013	Germany	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study
T. laevis	ATCC 42080	–	USA	Triticum sp.	PRJNA393337	Illumina MiSeq	Nguyen et al. (2019)
T. laevis	DAOMC 238040	1997	Australia	Triricum sp.	PRJNA393335	Illumina MiSeq	Nguyen et al. (2019)
T. laevis	LLFL (CBS 144826)	2015	Germany	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study
T. laevis	L-19 (CBS 145173)	–	–	Triticum aestivum	PRJEB40624	Illumina HiSeq 4000	This study

^aWesterdijk Fungal Biodiversity Institute (CBS-KNAW; Utrecht, The Netherlands)

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ISSN: 2210-6359

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