Variation in mitochondrial genome primary sequence among whole-genome-sequenced strains of Neurospora crassa

IMA Fungus

Table 3. Mitochondrial open reading frames (ORF) with polymorphisms relative to the reference genome.

ORF	Name	Type
SNPs
NCU16007	NADH dehydrogenase subunit 3	Intron SNPs
NCU16008	NADH dehydrogenase subunit 4L	Intron SNPs
NCU16009	hypothetical protein	Intron SNPs
NCU16012	NADH dehydrogenase subunit 5	Intron SNPs
NCU16015	laglidadg endonuclease	5′ and CDS SNPs
INDELS
NCU16001	NADH dehydrogenase subunit 2	FS
NCU16002	conserved hypothetical protein	FS
NCU16003	cytochrome c oxidase subunit 3	FS
NCU16004	NADH dehydrogenase subunit 6	FS
NCU16005	mitochondrial ribosomal protein S5 (S3)	FS
NCU16007	NADH dehydrogenase subunit 3	int, 5′, 3′
NCU16008	NADH dehydrogenase subunit 4L	int, 5′
NCU16009	hypothetical protein	int
NCU16010	laglidadg endonuclease	int
NCU16012	NADH dehydrogenase subunit 5	int
NCU16013	cytochrome b	int
NCU16015	laglidadg endonuclease	FS
NCU16016	cytochrome c oxidase subunit 1	5′, 3′
NCU16017	hypothetical protein	FS
NCU16018	NADH dehydrogenase subunit 1	int
NCU16019	group I intron endonuclease	FS
NCU16020	NADH dehydrogenase subunit 4	int
NCU16022	hypothetical protein	FS
NCU16024	ATPase subunit 8	int
NCU16025	ATPase subunit 6	int

ISSN: 2210-6359