Table 1 List of specimens used for the molecular phylogenetic study (Fig. 1).
Taxon | Original code | Culture acc. no. | Origin | Locality/Collecting data (or origin in case of reference sequences retrieved from GenBank) | GenBank Acc. no. | |
|---|---|---|---|---|---|---|
Alpha-Actin | Beta-Tubulin | |||||
Ootheca comedens | XY00290 | BCC22770 | Thailand | Phu Hin Rong Kla National Park, Phitsanulok; BBH18116 | GQ160478 | GQ160486 |
Ootheca comedens | XY00513 | BCC25014 | Thailand | Khao Nan National Park, Nakhon Si Thammarat; BBH25875 | GQ160479 | GQ160487 |
Ootheca comedens | XY00531 | BCC25152 | Thailand | Khao Nan National Park, Nakhon Si Thammarat; BBH25876 | GQ160480 | GQ160488 |
Ootheca comedens | XY00534 | BCC25155 | Thailand | Khao Ban That Wildlife Sanctuary Wildlife Sanctuary, Trang; BBH25877 | GQ160481 | GQ160489 |
Ootheca comedens | XY00638 | BCC28080 | Thailand | Kaeng Krachan National Park, Phetchaburi; BBH19755 | GQ160482 | GQ160490 |
Ootheca depressa | XY00402 | BCC23016 | Thailand | Doi Inthanon National Park, Chiang Mai; BBH18222 | GQ160483 | GQ160491 |
Ootheca depressa | XY00619 | BCC28073 | Thailand | Doi Inthanon National Park, Chiang Mai; BBH19737 | GQ160484 | GQ160492 |
Ootheca depressa | XY00636 | BCC28079 | Thailand | Doi Inthanon National Park, Chiang Mai (no specimen) | GQ160485 | GQ160493 |
Theissenia pyrenocrata | TL-11480 | none | Ecuador | Orellana, TL-11480 (QCNE, C) | GQ247716 | GQ247717 |
Amphilogia gyrosa | none | BCRC34145 | Taiwan | Ju & Hsieh 91123101 (HAST) (Ju et al. 2007) | EF025600 | EF025615 |
Annulohypoxylon bovei var. microsporum | none | BCRC34012 | Taiwan | Ju & Hsieh 90081914 (HAST) (Hsieh et al. 2005) | AY951765 | AY951654 |
Annulohypoxylon cohaerens | none | BCRC34013 | France | Fournier JF-03041 (Hsieh et al. 2005) | AY951766 | AY951655 |
Annulohypoxylon moriforme var. microdiscus | none | BCRC34018 | Taiwan | Ju & Hsieh 90080807 (HAST) (Hsieh et al. 2005) | AY951769 | AY951660 |
Annulohypoxylon nitens | none | BCRC34021 | Taiwan | Guu 91022108 (HAST) (Hsieh et al. 2005) | AY951772 | AY951663 |
Annulohypoxylon squamulosum | none | BCRC34022 | Taiwan | Holotype (HAST), see Ju et al. (2004) as Hypoxylon squamulosum. and Hsieh et al. (2005) | AY951774 | AY951665 |
Biscogniauxia anceps | none | BCRC34029 | France | Candoussau (Rogers et al. 1996, (Hsieh et al. 2005) | AY951783 | AY951671 |
Biscogniauxia arima | none | BCRC34030 | Mexico | Isotype (Ju et al.. 1998, Hsieh et al. 2005) | AY951784 | AY951672 |
Biscogniauxia capnodes | none | BCRC34032 | Taiwan | Ju 77031509 (Ju et al. 1998, (Hsieh et al. 2005) | AY951787 | AY951675 |
Biscogniauxia cylindrispora | none | BCRC33717 | Taiwan | Holotype (Ju & Rogers 2001, (Hsieh et al. 2005) | AY951791 | AY951679 |
Biscogniauxia latirima | none | BCRC34036 | Taiwan | Ju & Hsieh 90080703 (HAST) (Hsieh et al. 2005) | AY951795 | AY951683 |
Biscogniauxia mediterranea | none | BCRC34037 | France | Candoussau 366 (Ju et al. 1998, Hsieh et al. 2005) | AY951796 | AY951684 |
Biscogniauxia philippinensis var. microspora | none | BCRC33720 | Taiwan | Ju 89041101 (HAST) (Ju & Rogers 2001, Hsieh et al. 2005) | AY951797 | AY951685 |
Biscogniauxia simplicior | none | BCRC34038 | France | Candoussau 5354A (Ju et al. 1998, Hsieh et al. 2005) | AY951798 | AY951686 |
Cryphonectria macrospora | none | BCRC34146 | Taiwan | Ju & Hsieh 94031513 (HAST) (Ju et al. 2007) | EF025587 | EF025618 |
Daldinia caldariorum | none | BCRC34042 | Taiwan | Chen 957 (HAST) (Hsieh et al. 2005) | AY951802 | AY951690 |
Daldinia vernicosa | none | BCRC34048 | Germany | Wollweber 2899 (Ju et al. 1999 and Bitzer et al. 2008; as D. fissa); now deposited in KR 0026318 | AY951809 | AY951697 |
Daldinia loculata | none | KC1525 (Kew) | UK | K[M] 24541 (Stadler et al. 2001, Hsieh et al. 2005) | AY951810 | AY951698 |
Hypoxylon rubiginosum | none | BCRC34116 | UK | J.D. Rogers (Ju & Rogers 1996, (Hsieh et al. 2005)) | AY951862 | AY951751 |
Hypoxylon shearii var. minor | none | BCRC34093 | Mexico | Isotype (WSP) (San Martin et al. 1999, (Hsieh et al. 2005)) | AY951864 | AY951753 |
Kretzschmaria clavus | none | BCRC34147 | French Guiana | Huhndorf 803 (WSP) (Rogers & Ju 1998, Hsieh et al. 2009) | EF025596 | EF025611 |
Kretzschmaria lucidula | none | BCRC34148 | French Guiana | Huhndorf 677 (Rogers & Ju 1998, Hsieh et al. 2009) | EF025595 | EF025610 |
Kretzschmaria megalospora | none | N/A | Malaysia | M. Whalley FH 64–97 (JDR) (Hsieh et al. 2009) | EF025594 | EF025609 |
Nemania illita | none | BCRC34150 | USA | Missouri, Columbus, S.J. Tsai (JDR) (Hsieh et al. 2009) | EF025593 | EF025608 |
Nemania primolutea | none | BCRC34151 | Taiwan | Holotype (WSP) (Ju et al. 2005, Hsieh et al. 2009) | EF025592 | EF025607 |
Rosellinia lamprostoma | none | BCRC34152 | Taiwan | Ju & Hsieh 89112602 (HAST) (Hsieh et al. 2009) | EF025589 | EF025604 |
Rosellinia necatrix | none | BCRC34153 | Taiwan | Ju & Hsieh 89062904 (HAST) (Hsieh et al. 2009) | EF025588 | EF025603 |
Stilbohypoxylon elaeicola | none | BCRC34154 | French Guiana | Huhndorf 928 (Rogers and Ju 1997, as S. moelleri; Hsieh et al. 2009) | EF025601 | EF025616 |
Stilbohypoxylon quisquiliarum | none | BCRC34155 | French Guiana | Huhndorf 940 (Rogers & Ju 1997) (Hsieh et al. 2009) | EF025590 | EF025605 |
Stilbohypoxylon quisquiliarum | none | BCRC34156 | Taiwan | Ju & Hsieh 89091608 (HAST) (Hsieh et al. 2009) | EF025591 | EF025606 |
Theissenia (Ootheca) cinerea | none | BCRC34157 | Taiwan | Holotype (HAST) (Ju et al. 2003) | EF025598 | EF025613 |
Theissenia (Ootheca) rogersii | none | BCRC34158 | Taiwan | Holotype (HAST) (Ju et al. 2007) | EF025597 | EF025612 |
Whalleya microplaca | none | BCRC34159 | Taiwan | Ju & Hsieh 91111215 (HAST) (Hsieh et al. 2009) | EF025599 | EF025614 |
Xylaria bambusicola | none | BCRC34102 | Taiwan | Holotype (WSP) (Ju & Rogers 1999, Hsieh et al. 2009)) | AY951873 | AY951762 |
Xylaria venosula | none | BCRC34160 | USA | Hawaii, Ju & Hsieh 94080508 (HAST) (Hsieh et al. 2009) | EF025602 | EF025617 |