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Table 1 Summary of whole genome DNA sequence assemblies generated in the current study, Rutstroemia sydowiana CBS 115975 and Sclerotinia echinophila CBS 11548, and previously published genome sequences from the family Sclerotineaceae. The genomes of R. sydowiana CBS 115975, S. echinophila CBS 11548, and S. borealis F-4157 were generated using next generation sequencing technology; S. sclerotiorum 1980 and B. cinerea T4 genomes were produced from a Sanger sequencing approach. Not all summary data were available for S. borealis F-4157.

From: Draft genomes of Amanita jacksonii, Ceratocystis albifundus, Fusarium circinatum, Huntiella omanensis, Leptographium procerum, Rutstroemia sydowiana, and Sclerotinia echinophila

  Rutstroemia sydowiana CBS 115975 Sclerotinia echinophila CBS 11548 Sclerotinia borealis F-4157 Sclerotinia sclerotiorum 1980 Botytris cinerea T4
Summary data      
Coverage 121 101 23 9.1 10
CEGMA 97.20% 93.60% 99.20% 100.00% 98.40%
Total sequence length (Mb) 51.9 40.3 39.5 38.3 39.5
Number of scaffolds 11591 7348 1241 36 118
Scaffold N50 14947 9536 130819 1630000 562000
Number of contigs 14655 12842 1741 679 2281
Contig N50 8570 4918 79787 122550 35000
GC (%) 43.1 43.1 42 41.8 42.4
Predicted gene models 17350 12555 10171 14503 10391
Predicted secreted proteins 1120 880 - 879 630
Predicted CAZYmes      
Total CAZYmes 789 641 - 578 657
Pectate lyases 10 4 - 6 11
Glycosyltransferases 122 100 - 92 105
Glycoside hydrolases 316 248 - 227 245
Carbohydrate esterases 133 120 - 99 130
Carbohydrate binding motifs 66 64 - 62 71
Predicted Secondary Metabolite (SM) Clusters      
Total SM clusters 74 58 - 35 50
Type I polyketide synthetases (PKSs) 27 20 - 15 14
Type III PKSs 2 2 - 1 1
Nonribosomal peptide synthetases (NRPSs) 10 7 - 7 12
Terpene clusters 14 6 - 4 8
Hglks 2 4 - 0 0