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Table 1 Identity, date and location of isolation, host information and GenBank accession numbers (where available) for Phytophthora spp. considered in this study.

From: Phytophthora boodjera sp. nov., a damping-off pathogen in production nurseries and from urban and natural landscapes, with an update on the status of P. alticola

Species

Location

Isolation date

Host association

Isolate number 2

 

GenBank Accession No.

 
     

ITS

BT

HSP

ENO

cox1

P. alticola 1

Midillovo, KwaZulu-Natal

2000–20046

Eucalyptus badjensis

CMW 19417

     

ex-holotype

(KZN), South Africa

  

CBS 121937

q-bank5

   

q-bank5

P. alticola 1

Midillovo, KZN, South Africa

2000–2004

E. macarthurii

CMW 19424

DQ988197

DQ988236

   

ex-paratype

   

CBS 121938

     

P. alticola1

Paulpetersburg, KZN,

2000–2004

E. dunnii

CMW 19425

DQ988196

DQ988235

   

ex-paratype

South Africa

  

CBS 121939

q-bank5

   

q-bank5

    

CMW 342794

HQ013214

KJ372275

KJ396703

KJ396731

KJ396686

P. alticola1

unknown

 

Unknown

P16052

GU259141

   

HQ261245

P. boodjera

Mt Claremont, Perth, WA

05/2011

Agonis flexuosa

PAB 11.564

KC748460

KJ372280

KJ396708

KJ396736

KJ396687

 

Dalkeith, Perth, WA

05/2011

Eucalyptus marginata

PAB 11.674

KC748461

KJ372276

KJ396704

KJ396732

KJ396682

 

Ravensthorpe, WA

08/2006

Banksia media

VHS 162823

EU301117

KJ372281

KJ396709

KJ396737

HQ013198

 

Kensington, Perth, WA

02/2012

Eucalyptus sp.

VHS 266314

KJ372240

KJ372277

KJ396705

KJ396733

KJ396683

ex-holotype

Tincurrin, WA

03/2012

Soil dump

VHS 268064

KJ372244

KJ372283

KJ396710

KJ396738

KJ396688

    

CBS 138637

     
 

Tincurrin, WA

04/2012

Eucalyptus sp.

VHS 270164

KJ372245

    
 

Tincurrin, WA

04/2012

Eucalyptus sp.

VHS 270174

KJ372246

KJ372284

KJ396711

KJ396739

KJ396689

 

Tincurrin, WA

04/2012

Eucalyptus sp.

VHS 270184

KJ372247

KJ372285

KJ396712

KJ396740

KJ396690

 

Tincurrin, WA

04/2012

Eucalyptus sp.

VHS 270204

KJ372248

KJ372286

KJ396713

KJ396741

KJ396691

 

Tincurrin, WA

04/2012

Eucalyptus sp.

VHS 270214

KJ372249

KJ372287

KJ396714

KJ396742

KJ396692

 

Tincurrin, WA

04/2012

Eucalyptus sp.

VHS 270224

KJ372250

KJ372288

KJ396715

KJ396743

KJ396693

 

Tincurrin, WA

04/2012

E. polybractea

VHS 271714

KJ372241

KJ372278

KJ396706

KJ396734

KJ396684

 

Stirling, Perth, WA

11/2012

Xanthorrhoea preissii

VHS 273824

KJ372242

KJ372279

KJ396707

KJ396735

KJ396685

 

Gingin, WA

11/2012

B. grandis

VHS 28352

     
 

Northam, WA

09/2013

Corymbia calophylla

TP 13.39

     

P. arenaria

Kalbarri, WA

06/1986

Kwongan heathland

DDS 12214

EU593266

KJ372297

KJ396724

KJ396752

HQ013201

 

Eneabba, WA

02/2009

E. drummondii

CBS 1258004

HQ013205

KJ372296

KJ396723

KJ396751

HQ013215

ex-holotype

Eneabba, WA

02/2009

E. drummondii

CBS 1279504

HQ013219

KJ372289

KJ396716

KJ396744

HQ013203

 

Lancelin, WA

11/2001

B. menziesii

VHS 98614

EU301118

KJ372290

KJ396717

KJ396745

HQ013202

    

IMI 389662

     
 

Bunbury, WA

02/2002

B. littoralis

VHS 10154

EU301114

KJ372298

KJ396725

KJ396753

KJ396697

    

IMI 389663

     
 

Badgingarra, WA

04/2006

B. attenuata

VHS 154534

EU301115

KJ372291

KJ396718

KJ396746

HQ013199

 

Badgingarra, WA

04/2006

B. attenuata

VHS 154894

HQ013216

KJ372292

KJ396719

KJ396747

HQ013200

 

Eneabba, WA

06/2008

B. attenuata

VHS 199314

HQ013217

KJ372293

KJ396720

KJ396748

KJ396694

 

Eneabba, WA

11/2008

B. attenuata

VHS 205374

KJ372253

KJ372299

KJ396727

KJ396754

KJ396698

 

Ellenbrook, Perth, WA

09/2011

Banksia sp.

VHS 253704

KJ372254

KJ372300

KJ396726

KJ396755

KJ396699

 

Dongara, WA

11/2012

Banksia sp.

VHS 28145

KJ372251

KJ372294

KJ396721

KJ396749

KJ396695

 

Muchea, WA

12/2012

X. preissii

VHS 28269

KJ372252

KJ372295

KJ396722

KJ396750

KJ396696

P. frigida

South Africa

 

Eucalyptus sp.

P 16059

GU259147

   

HQ261313

P. palmivora

United States

  

P 0113

GU259121

EU080465

EU080468

EU080467

HQ261383

P. heveae

United States

  

P 10167

GU259516

EU080796

EU080799

EU080798

 

P. quercetorum

United States

  

MD 9.2

 

EU080901

EU080904

EU080903

 

P. castaneae

Japan

  

P 10187

FJ801304

EUO80803

EU080806

EU080805

HQ261348

P. megakarya

Sao Tome and Principe

  

P 8516

PD5

EU079970

EU079973

EU079972

HQ261356

P. nicotianeae

Australia

 

Nicotiana tabacum

332

    

AY129169

P. cactorum

United States

 

Malus sylvestris

NY 568

    

AY129174

P. plurivora

Germany

 

Quercus robur

CBS 124087

    

FJ237510

  1. 1See Table 2 for explanation on the status of these isolates.
  2. 2Abbreviations of isolates in culture collections (where known): CBS = Centraalbureau voor Schimmelcultures, The Netherlands; IMI = CABI Bioscience (formerly International Mycological Institute), UK; VHS = Vegetation Health Service Collection, Department of Parks and Wildlife, Perth, Australia; DDS = earlier prefix of VHS Collection; PAB = Paul Barber, in Murdoch University (MU) Culture Collection; TP = Trudy Paap, in Murdoch University (MU) Culture Collection; CMW = culture collection of Forestry and Agriculture Biotechnology Institute, University of Pretoria, South Africa; P = isolate codes from World Phytophthora Collection, University of California, Riverside.
  3. 3Designated as Phytophthora taxon arenaria-like by Rea et al. (2011).
  4. 4Isolates used in the morphological study.
  5. 5Sequence available on Phytophthora database (https://doi.org/www.phytophthoradb.org/)_or q-bank (https://doi.org/www.q-bank.eu/).
  6. 6No specific dates provided by Maseko et al. (2004), just date range under ‘sampling and isolation’.