From: Emerging citrus diseases in Europe caused by species of Diaporthe
Species | Culture no. 1 | Host | Locality | Associated symptoms | Â | Â | GenBank no. 2 | Â | Â |
---|---|---|---|---|---|---|---|---|---|
ITS | tub2 | his3 | tef1 | cal | |||||
D. angelicae | CBS 111592 | Heracleum sphondylium | Austria | - | KC343026 | KC343994 | KC343511 | KC343752 | KC343268 |
D. arecae | CBS 161.64 | Areca catechu | India | - | KC343032 | KC344000 | KC343516 | KC343758 | KC343274 |
 | CBS 535.75 | Citrus sp. | Suriname | - | KC343033 | KC344001 | KC343517 | KC343759 | KC343275 |
D. arengae | CBS 114979 | Arenga engleri | Hong Kong | - | KC343034 | KC344002 | KC343518 | KC343760 | KC343276 |
D. baccae | CBS 136972 | Vaccinium corymbosum | Italy | - | KJ160565 | MF418509 | MF418264 | KJ160597 | - |
 | CPC 26170 = CBS 142545 | Citrus sinensis ‘Tarocco Tapi’ | Italy, Catania | Twig dieback | MF418351 | MF418510 | MF418265 | MF418430 | MF418185 |
 | CPC 26465 | Citrus limon | Italy, Catania | Branch canker | MF418352 | MF418511 | MF418266 | MF418431 | MF418186 |
 | CPC 26963 | Citrus paradisi | Italy, Vibo Valentia | Branch canker | MF418353 | MF418512 | MF418267 | MF418432 | MF418187 |
 | CPC 27029 | Citrus sinensis | Italy, Vibo Valentia | Twig dieback | MF418354 | MF418513 | MF418268 | MF418433 | MF418188 |
 | CPC 27075 | Citrus limon | Italy, Vibo Valentia | Twig dieback | MF418355 | MF418514 | MF418269 | MF418434 | MF418189 |
 | CPC 27079 | Citrus limon | Italy, Vibo Valentia | Twig dieback | MF418356 | MF418515 | MF418270 | MF418435 | MF418190 |
 | CPC 27821 | Citrus reticulata ‘Caffin’ | Italy, Cosenza | Trunk canker | MF418357 | MF418516 | MF418271 | MF418436 | MF418191 |
 | CPC 27831 = CBS 142546 | Citrus sinensis | Italy, Catania | Trunk canker | MF418358 | MF418517 | MF418272 | MF418437 | MF418192 |
 | CPC 27834 | Citrus sinensis | Italy, Catania | Trunk canker | MF418359 | MF418518 | MF418273 | MF418438 | MF418193 |
 | CPC 27835 | Citrus sinensis | Italy, Catania | Trunk canker | MF418360 | MF418519 | MF418274 | MF418439 | MF418194 |
 | CPC 27836 | Citrus sinensis | Italy, Catania | Trunk canker | MF418361 | MF418520 | MF418275 | MF418440 | MF418195 |
 | CPC 27837 | Citrus sinensis | Italy, Catania | Trunk canker | MF418362 | MF418521 | MF418276 | MF418441 | MF418196 |
 | CPC 27850 | Citrus sinensis | Italy, Catania | Twig dieback | MF418363 | MF418522 | MF418277 | MF418442 | MF418197 |
 | CPC 27852 | Citrus sinensis | Italy, Catania | Twig dieback | MF418364 | MF418523 | MF418278 | MF418443 | MF418198 |
D. biconispora | ICMP20654 | Citrus grandis | China | - | KJ490597 | KJ490418 | KJ490539 | KJ490476 | - |
D. biguttulata | ICMP20657 | Citrus limon | China | - | KJ490582 | KJ490403 | KJ490524 | KJ490461 | - |
D. citri | CBS 134237 | Citrus reticulata | China | - | JQ954660 | KC357426 | MF418279 | JQ954676 | KC357465 |
 | CBS 134239 | Citrus sinensis | Florida, USA | - | KC357553 | KC357456 | MF418280 | KC357522 | KC357488 |
 | CBS 135422 | Citrus sp. | USA | - | KC843311 | KC843187 | MF418281 | KC843071 | KC843157 |
D. citriasiana | CBS 134240 | Citrus unshiu | China | - | JQ954645 | KC357459 | MF418282 | JQ954663 | KC357491 |
D. citrichinensis | CBS 134242 | Citrus sp. | China | - | JQ954648 | MF418524 | KJ420880 | JQ954666 | KC357494 |
D. cuppatea | CBS 117499 | Aspalathus linearis | South Africa | - | AY339322 | JX275420 | KC343541 | AY339354 | JX197414 |
D. cytosporella | CBS 137020 | Citrus limon | Spain | - | KC843307 | KC843221 | MF418283 | KC843116 | KC843141 |
D. discoidispora | ICMP20662 | Citrus unshiu | China | - | KJ490624 | KJ490445 | KJ490566 | KJ490503 | - |
D. endophytica | ZJUD73 | Citrus unshiu | China | - | KJ490608 | KJ490429 | KJ490550 | KJ490487 | - |
D. eres | CBS 439.82 | Cotoneaster sp. | Scotland | - | KC343090 | KC344058 | KC343574 | KC343816 | KC343332 |
D. foeniculina | CBS 187.27 | Camellia sinensis | Italy | - | KC343107 | KC344075 | KC343591 | KC343833 | KC343349 |
 | CBS 111553 | Foeniculum vulgare | Spain | - | KC343101 | KC344069 | KC343585 | KC343827 | KC343343 |
 | CBS 111554 | Foeniculum vulgare | Portugal | - | KC343102 | KC344070 | KC343586 | KC343828 | KC343344 |
 | CBS 123208 | Foeniculum vulgare | Portugal | - | KC343104 | KC344072 | KC343588 | KC343830 | KC343346 |
 | CBS 123209 | Foeniculum vulgare | Portugal | - | KC343105 | KC344073 | KC343589 | KC343831 | KC343347 |
 | CBS 135430 | Citrus limon | USA | - | KC843301 | KC843215 | MF418284 | KC843110 | KC843135 |
 | CPC 26184 | Citrus maxima | Italy, Messina | Branch canker | MF418365 | MF418525 | MF418285 | MF418444 | MF418199 |
 | CPC 26194 | Citrus sinensis ‘Sanguinello’ | Italy, Messina | Branch canker | MF418366 | MF418526 | MF418286 | MF418445 | MF418200 |
 | CPC 26365 | Citrus limon | Italy, Catania | Twig dieback | MF418367 | MF418527 | MF418287 | MF418446 | MF418201 |
 | CPC 26439 | Citrus reticulata | Italy, Catania | Twig dieback | MF418368 | MF418528 | MF418288 | MF418447 | MF418202 |
 | CPC 26441 | Citrus reticulata | Italy, Catania | Twig dieback | MF418369 | MF418529 | MF418289 | MF418448 | MF418203 |
 | CPC 26461 | Citrus reticulata | Italy, Catania | Twig dieback | MF418370 | MF418530 | MF418290 | MF418449 | MF418204 |
 | CPC 26863 | Citrus maxima | Greece, Missolonghi | Branch canker | MF418371 | MF418531 | MF418291 | MF418450 | MF418205 |
 | CPC 26873 | Citrus reticulata | Greece, Arta | Twig dieback | MF418372 | MF418532 | MF418292 | MF418451 | MF418206 |
 | CPC 26883 | Citrus maxima | Greece, Missolonghi | Branch canker | MF418373 | MF418533 | MF418293 | MF418452 | MF418207 |
 | CPC 26885 | Citrus bergamia | Greece, Missolonghi | Branch canker | MF418374 | MF418534 | MF418294 | MF418453 | MF418208 |
 | CPC 26913 | Citrus limon | Greece, Missolonghi | Branch canker | MF418375 | MF418535 | MF418295 | MF418454 | MF418209 |
 | CPC 26923 | Citrus maxima | Greece, Missolonghi | Branch canker | MF418376 | MF418536 | MF418296 | MF418455 | MF418210 |
 | CPC 26927 | Citrus maxima | Greece, Missolonghi | Branch canker | MF418377 | MF418537 | MF418297 | MF418456 | MF418211 |
 | CPC 26953 | Citrus bergamia | Greece, Missolonghi | Branch canker | MF418378 | MF418538 | MF418298 | MF418457 | MF418212 |
 | CPC 26967 | Citrus mitis | Italy, Messina | Twig dieback | MF418379 | MF418539 | MF418299 | MF418458 | MF418213 |
 | CPC 26971 | Citrus mitis | Italy, Messina | Twig dieback | MF418380 | MF418540 | MF418300 | MF418459 | MF418214 |
 | CPC 27027 | Citrus limon | Italy, Cosenza | Branch canker | MF418381 | MF418541 | MF418301 | MF418460 | MF418215 |
 | CPC 27033 | Citrus mitis | Italy, Messina | Twig dieback | MF418382 | MF418542 | MF418302 | MF418461 | MF418216 |
 | CPC 27037 | Citrus paradisi | Italy, Vibo Valentia | Branch canker | MF418383 | MF418543 | MF418303 | MF418462 | MF418217 |
 | CPC 27041 | Citrus sinensis | Italy, Cosenza | Branch canker | MF418384 | MF418544 | MF418304 | MF418463 | MF418218 |
 | CPC 27167 | Citrus paradisi | Italy, Vibo Valentia | Branch canker | MF418385 | MF418545 | MF418305 | MF418464 | MF418219 |
 | CPC 27756 | Citrus limon | Italy, Catania | Trunk canker | MF418386 | MF418546 | MF418306 | MF418465 | MF418220 |
 | CPC 27832 | Citrus sinensis | Italy, Catania | Trunk canker | MF418387 | MF418547 | MF418307 | MF418466 | MF418221 |
 | CPC 27833 | Citrus sinensis | Italy, Catania | Trunk canker | MF418388 | MF418548 | MF418308 | MF418467 | MF418222 |
 | CPC 27859 | Citrus paradisi | Malta, Gozo | Trunk canker | MF418389 | MF418549 | MF418309 | MF418468 | MF418223 |
 | CPC 27877 | Citrus limon | Malta, Gozo | Trunk canker | MF418390 | MF418550 | MF418310 | MF418469 | MF418224 |
 | CPC 27895 | Citrus japonica | Malta, Gozo | Twig dieback | MF418391 | MF418551 | MF418311 | MF418470 | MF418225 |
 | CPC 27896 | Citrus japonica | Malta, Gozo | Twig dieback | MF418392 | MF418552 | MF418312 | MF418471 | MF418226 |
 | CPC 27897 | Citrus japonica | Malta, Gozo | Twig dieback | MF418393 | MF418553 | MF418313 | MF418472 | MF418227 |
 | CPC 27898 | Citrus japonica | Malta, Gozo | Twig dieback | MF418394 | MF418554 | MF418314 | MF418473 | MF418228 |
 | CPC 27901 | Citrus limon | Malta, Gozo | Branch canker | MF418395 | MF418555 | MF418315 | MF418474 | MF418229 |
 | CPC 27903 | Citrus limon | Malta, Gozo | Branch canker | MF418396 | MF418556 | MF418316 | MF418475 | MF418230 |
 | CPC 27945 | Citrus paradisi | Portugal, Faro | Branch canker | MF418397 | MF418557 | MF418317 | MF418476 | MF418231 |
 | CPC 27947 | Citrus sinensis | Portugal, Faro | Branch canker | MF418398 | MF418558 | MF418318 | MF418477 | MF418232 |
 | CPC 27949 | Citrus sinensis | Portugal, Faro | Branch canker | MF418399 | MF418559 | MF418319 | MF418478 | MF418233 |
 | CPC 27950 | Citrus sinensis | Portugal, Faro | Twig dieback | MF418400 | MF418560 | MF418320 | MF418479 | MF418234 |
 | CPC 27959 | Citrus sinensis | Portugal, Faro | Twig dieback | MF418401 | MF418561 | MF418321 | MF418480 | MF418235 |
 | CPC 28033 = CBS 142547 | Citrus sinensis ‘Valencia’ | Portugal, Mesquita | Twig dieback | MF418402 | MF418562 | MF418322 | MF418481 | MF418236 |
 | CPC 28035 | Citrus paradisi | Portugal, Faro | Twig dieback | MF418403 | MF418563 | MF418323 | MF418482 | MF418237 |
 | CPC 28039 | Citrus limon | Portugal, Monchique | Twig dieback | MF418404 | MF418564 | MF418324 | MF418483 | MF418238 |
 | CPC 28041 | Citrus limon | Portugal, Monchique | Twig dieback | MF418405 | MF418565 | MF418325 | MF418484 | MF418239 |
 | CPC 28043 | Citrus limon | Portugal, Monchique | Twig dieback | MF418406 | MF418566 | MF418326 | MF418485 | MF418240 |
 | CPC 28045 | Citrus limon | Portugal, Monchique | Twig dieback | MF418407 | MF418567 | MF418327 | MF418486 | MF418241 |
 | CPC 28047 | Citrus limon | Portugal, Monchique | Twig dieback | MF418408 | MF418568 | MF418328 | MF418487 | MF418242 |
 | CPC 28071 | Citrus limon | Spain, Algemesi | Twig dieback | MF418409 | MF418569 | MF418329 | MF418488 | MF418243 |
 | CPC 28072 | Citrus limon | Spain, Algemesi | Twig dieback | MF418410 | MF418570 | MF418330 | MF418489 | MF418244 |
 | CPC 28073 | Citrus reticulata | Spain, Algemesi | Twig dieback | MF418411 | MF418571 | MF418331 | MF418490 | MF418245 |
 | CPC 28074 | Citrus reticulata | Spain, Algemesi | Twig dieback | MF418412 | MF418572 | MF418332 | MF418491 | MF418246 |
 | CPC 28077 | Citrus limon | Spain, Algemesi | Twig dieback | MF418413 | MF418573 | MF418333 | MF418492 | MF418247 |
 | CPC 28079 | Citrus reticulata | Spain, Algemesi | Twig dieback | MF418414 | MF418574 | MF418334 | MF418493 | MF418248 |
 | CPC 28081 = CBS 142548 | Citrus reticulata | Spain, Algemesi | Twig dieback | MF418415 | MF418575 | MF418335 | MF418494 | MF418249 |
 | CPC 28163 | Microcitrus australasica | Italy, Catania | Twig dieback | MF418416 | MF418576 | MF418336 | MF418495 | MF418250 |
 | CPC 31135 | Citrus limon | Malta, Gozo | Branch canker | MF418417 | MF418577 | MF418337 | MF418496 | MF418251 |
 | CPC 31159 | Citrus sinensis | Malta, Zurrieq | Branch canker | MF418418 | MF418578 | MF418338 | MF418497 | MF418252 |
D. helianthi | CBS 344.94 | Helianthus annuus | - | - | KC343114 | KC344082 | KC343598 | KC343840 | KC343356 |
 | CBS 592.81 | Helianthus annuus | Serbia | - | KC343115 | KC344083 | KC343599 | KC343841 | JX197454 |
D. hongkongensis | CBS 115448 | Dichroa febrifuga | China | - | KC343119 | KC344087 | KC343603 | KC343845 | KC343361 |
D. inconspicua | CBS 133813 | Maytenus ilicifolia | Brazil | - | KC343123 | KC344091 | KC343607 | KC343849 | KC343365 |
D. infertilis | CBS 199.39 | Unknown | Italy | - | KC343051 | KC344019 | KC343535 | KC343777 | KC343293 |
 | CBS 230.52 | Citrus sinensis | Suriname | - | KC343052 | KC344020 | KC343536 | KC343778 | KC343294 |
 | CPC 20322 | Glycine max | Brazil | - | KC343053 | KC344021 | KC343537 | KC343779 | KC343295 |
D. limonicola | CPC 27869 | Citrus limon | Malta, Gozo | Trunk canker | MF418419 | MF418579 | MF418339 | MF418498 | MF418253 |
 | CPC 27871 | Citrus limon | Malta, Gozo | Trunk canker | MF418420 | MF418580 | MF418340 | MF418499 | MF418254 |
 | CPC 27879 | Citrus limon | Malta, Gozo | Branch canker | MF418421 | MF418581 | MF418341 | MF418500 | MF418255 |
 | CPC 28200 = CBS 142549 | Citrus limon | Malta, Gozo | Branch canker | MF418422 | MF418582 | MF418342 | MF418501 | MF418256 |
 | CPC 31137 = CBS 142550 | Citrus limon | Malta, Zurrieq | Branch canker | MF418423 | MF418583 | MF418343 | MF418502 | MF418257 |
D. melitensis | CPC 27873 = CBS 142551 | Citrus limon | Malta, Gozo | Branch canker | MF418424 | MF418584 | MF418344 | MF418503 | MF418258 |
 | CPC 27875 = CBS 142552 | Citrus limon | Malta, Gozo | Branch canker | MF418425 | MF418585 | MF418345 | MF418504 | MF418259 |
D. multigutullata | ICMP20656 | Citrus grandis | China | - | KJ490633 | KJ490454 | KJ490575 | KJ490512 | - |
D. novem | CBS 127270 | Glycine max | Croatia | - | KC343156 | KC344124 | KC343640 | KC343882 | KC343398 |
 | CBS 127271 | Glycine max | Croatia | - | KC343157 | KC344125 | KC343641 | KC343883 | KC343399 |
 | CPC 26188 = CBS 142553 | Citrus japonica | Italy, Messina | Twig dieback | MF418426 | MF418586 | MF418346 | MF418505 | MF418260 |
 | CPC 28165 = CBS 142554 | Citrus aurantiifolia | Italy, Catania | Twig dieback | MF418427 | MF418587 | MF418347 | MF418506 | MF418261 |
 | CPC 28167 | Citrus aurantiifolia | Italy, Catania | Twig dieback | MF418428 | MF418588 | MF418348 | MF418507 | MF418262 |
 | CPC 28169 | Citrus aurantiifolia | Italy, Catania | Twig dieback | MF418429 | MF418589 | MF418349 | MF418508 | MF418263 |
D. ovalispora | ICMP20659 | Citrus limon | China | - | KJ490628 | KJ490449 | KJ490570 | KJ490507 | - |
D. pseudomangiferae | CBS 101339 | Mangifera indica | Dominican Republic | - | KC343181 | KC344149 | KC343665 | KC343907 | KC343423 |
D. pseudophoenicicola | CBS 462.69 | Phoenix dactylifera | Spain | - | KC343184 | KC344152 | KC343668 | KC343910 | KC343426 |
D. rudis | CBS 113201 | Vitis vinifera | Portugal | - | KC343234 | KC344202 | KC343718 | KC343960 | KC343476 |
D. saccarata | CBS 116311 | Protea repens | South Africa | - | KC343190 | KC344158 | KC343674 | KC343916 | KC343432 |
D. sojae | FAU 635 | Glycine max | USA | - | KJ590719 | KJ610875 | KJ659208 | KJ590762 | - |
D. sojae | ZJUD68 | Citrus unshiu | China | - | KJ490603 | KJ490424 | KJ490545 | KJ490482 | - |
D. sterilis | CBS 136969 | Vaccinium corymbosum | Italy | - | KJ160579 | KJ160528 | MF418350 | KJ160611 | KJ160548 |
D. subclavata | ICMP20663 | Citrus unshiu | China | - | KJ490630 | KJ490451 | KJ490572 | KJ490509 | - |
D. unshiuensis | CGMCC3.17569 | Citrus unshiu | China | - | KJ490587 | KJ490408 | KJ490529 | KJ490466 | - |
Diaporthella corylina | CBS 121124 | Corylus sp. | China | - | KC343004 | KC343972 | KC343488 | KC343730 | KC343246 |