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Fig. 2 | IMA Fungus

Fig. 2

From: Draft genome of Cercospora zeina, Fusarium pininemorale, Hawksworthiomyces lignivorus, Huntiella decipiens and Ophiostoma ips

Fig. 2

Maximum likelihood (ML) tree based on partial gene sequences of β-tubulin and translation elongation factor 1-α. Sequence alignments were assembled with MAFFT version 7 (Katoh & Standley 2013). The program jModelTest v 2.1.7 (Guindon & Gascuel 2003, Darribo et al. 2012) was used to determine the best-fit substitution model (GTR+I+G substitution model) with gamma correction (Tavaré 1986). The ML phylogenetic analysis was performed using PhyML v 3.1 (Guindon & Gascuel 2010). Values at branch nodes are the bootstrapping confidence values with those ≥ 85 % shown. Indicated in bold are sequences from the Fusarium genomes of F. pininemorale and those of F. nygamai, F. temperatum and F. circinatum strain GL1327 which have been previously published in IMA fungus (Wingfield et al. 2012, 2015a, 2015b).

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