Ustilago species causing leaf-stripe smut revisited

Kruse, Julia; Dietrich, Wolfgang; Zimmermann, Horst; Klenke, Friedemann; Richter, Udo; Richter, Heidrun; Thines, Marco

doi:10.5598/imafungus.2018.09.01.05

IMA Fungus

Table 2 Diagnostic bases within the Ustilago striiformis and the Ustilago serpens complexes.

From: Ustilago species causing leaf-stripe smut revisited

									Gen Loci
	*atp* 2		*map*		*ssc* 1		*myosin*			*rpl* 4A		*rpl* 3		*sdh* 1		*tif2*	ITS
*U. striiformis-complex*	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base
on *Agrostis gigantea*	x	x	x	x	x	x	x	x	x	x	x	x	138	C / T	x	x	x	x
on *Agrostis stolonifera* and *A. rupestris*
on *Agrostis stolonifera* and *A. rupestris*	466	A / G	x	x	x	x	x	x	x	x	92	A / G	x	x	x	x	x	^x
on *Alopecurus pratensis*	358	A / G	192	G / T	x	x	83	T / C	x	x	x	x	x	x	x	x	x	x
on *Arrhenatherum elatius*	346	A / G	x	x	182	A / C	x	x	x	x	x	x	x	x		x	x	x
on *Bromus inermis*	191, 244	G / A	x	x	232	C / T	x	x	228, 311 ^{A / G 292} C / T		x	x	x	x	23	A / G	621	C / T
on *Calamagrostis epigejos*	91	A / G	x	x	x	x	x	x	x			x	x	x	65	T / C	102	T / C
on *Calamagrostis villosa*	535	T / C	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
on *Dactylis glomerata*		x	x	x	69, 198	A / G	x	x	120	T / C	40	A / G	x	x	x	x	617	A / G
on *Deschampsia caespitosa*	22, 94	A / G	227	T / C	x	x	133	A / G	x	x	199	T / C	x	x	x	x	576	A / G
on *Festuca* spp. and *Lolium* spp.	x	x	x	x	210, 214, 231 243	A / G T / C	x	x	x	x	x	x	x	x	x	x	x	A / G
on *Holcus* spp.	x	x	x	x	x	x	x	x	85	T / C	133	T / C	x	x	x	x	103	A / G
on *Milium effusum*	310	A/G				x	x	x	x	x	x	x	x	x	x	x	206	T / C
*U. serpens-complex*	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base	Pos.	Base
on *Bromus inermis*		x	X	x	x	x	x	x	x	x	x	x	x	x	x	x	260 629	C / T G / A
	175	G / A	92	A / C	88, 99	C / G	70	A / G	7	C / G			13	G / A			215	C / T
on *Calamagrostis epigejos*	181, 429, 496	T / C	203	C / T	93	G / A	225	T / C	91	T / C	28	G / T	25	G / T	xx		522	T / -
	352	A / G			255	G / T			187	G / T			100	A / G			597 606	A / T A / G
on *Elymus repens*	x	x	x	x	x	x	93	A / G	232	T / C	x	x	x	x	x	x	157 170	A / G C / T
							141	C / A			91	T / C					19	C / A
on *Phalaris arundinacea*	85	G / A	208	A / G	x	x	156	T / C	x	x	146	A / G	58, 256	A / G	x	x	38 186, 596	C / T A / -
																	188, 604	G / A

Slash (/) = instead of, x = no diagnostic bases.

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ISSN: 2210-6359

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