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Fig. 3 | IMA Fungus

Fig. 3

From: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata

Fig. 3

Maximum Likelihood tree of ex-type and authentic strains of Aspergillus sect. Nidulantes (25 strains) inferred based on an alignment of the concatenated sequences of the ITS-28S rDNA, ribosomal polymerase II, β-tubulin, and calmodulin genes. Data were resampled from Chen et al. (2016). DMSZ 5745 is labelled in red, and A. unguis was positioned as the outgroup. The Maximum Likelihood tree was based on the Tamura-Nei model. The tree with the highest log likelihood (−13 959.85) is shown. Branches are labelled with the percentage of trees in which the associated taxa clustered together. A discrete gamma distribution was used to model evolutionary rate differences among sites (5 categories (+G, parameter = 0.2371)). Branch lengths were measured in the number of substitutions/site. The dataset included 3329 positions. Data were analyzed in MEGA7 (Kumar et al. 2016). “Type” = ex-type cultures.

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