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Fig. 7 | IMA Fungus

Fig. 7

From: Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata

Fig. 7

Maximum Likelihood tree of genome-sequenced strains producing echinocandins (red) and selected strains of the Leotiomycetes (55 strains total) based on an alignment of the ITS and 28S rDNA. Botryotinia fuckeliana was positioned as the outgroup. The tree was inferred by using the maximum likelihood method based on the Kimura 2-parameter model. The tree with the highest log likelihood (4229.10) is shown. The percentage of trees in which the associated taxa clustered together is labelled on branch nodes. A discrete gamma distribution was used to model evolutionary rate differences among sites (5 categories (+G, parameter = 0.4881)). Branch lengths were measured in the number of substitutions/site. All positions containing gaps and missing data were eliminated. The dataset included 955 positions. Data were analyzed in MEGA7 (Kumar et al. 2016).

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