Skip to main content

Advertisement

Table 3 Phylogenetic data and the substitution models used in the phylogenetic analysis, per locus. Abbreviations of loci follow Table 1.

From: Novel primers improve species delimitation in Cercospora

Locus ITS tef1 actA cmdA his3 tub2 rpb2 gapdh
Number of characters 470 291 187 248 358 415 1229 869
Unique site patterns 16 75 48 66 63 105 259 231
Substitution model used SYM-gamma K80-gamma K80-gamma K80-gamma HKY-gamma GTR-gamma GTR-gamma GTR-I-gamma
Number of generations (n)     2 405 000    
Total number of trees (n)     4 812    
Sampled trees (n)     3 610