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Table 2 Fungal isolates used in this study and GenBank accession numbers.

From: Molecular phylogeny of Cytospora species associated with canker diseases of fruit and nut crops in California, with the descriptions of ten new species and one new combination

     

GenBank Accession

 

Species

Isolate a

Host

Geographic origin

ITS

ACT1 b

TEF1

TUB2 b

Cytospora abyssinica

CMW 10181

Eucalyptus globulus

Wondo Genet, Ethiopia

AY347353

—

—

—

C. ampulliformis

MFLUCC 16-0629

Acer platanoides

Russia

KY417727

KY417693

—

—

C. atrocirrhata

CFCC 89615

Jugulans regia

Xining, Qinghai, China

KF225610

—

—

—

C. austromontana

CMW 6735

Eucalyptus pauciflora

NSW, Australia

AY347361

—

—

—

C. berberidis

CFCC 89927

Berberis dasystachyum

Qinghai Province, China

KP340985

—

—

—

C. berkeleyi

StanfordT3

Eucalyptus globulus

Palo Alto, California, USA

AY347350

—

—

—

C. brevispora

CBS 116811

Eucalyptus grandis ×-tereticornis

Tchittanga, Republic of Congo

AF192315

—

—

—

C. carbonacea

CFCC 50055

Ulmus pumila

Qiqihar, Heilongjiang, China

KP281262

—

KP310851

—

C. cedri

CBS 196.50

Unknown host

Italy

AF192311

—

JX438575

—

C. centrivillosa

MFLUCC 16-1206

Sorbus domestica

Italy

MF190122

—

—

—

C. chrysosperma

CFCC 89619

Juglans regia

Yinchuan, Ningxia, China

KF225614

KF498677

—

—

C. cincta

LP47

Prunus armeniaca

Michigan, USA

AF191169

—

—

—

C. cinereostroma

CMW 5700

Eucalyptus globulus

Chile

AY347377

—

—

—

C. cotini

MFLUCC 14-1050

Cotinus coggygria

Russia

KX430142

—

—

—

C. curvata

MFLUCC 15-0865

Salix alba

Russia

KY417728

KY417694

—

—

C. davidiana

CXY1350

Populus davidiana

China

KM034870

—

—

—

C. diatrypelloidea

CMW 8549

Eucalyptus globulus

Orbost, Victoria, Australia

AY347368

—

—

—

C. disciformis

CMW 6509

Eucalyptus grandis

Uruguay

AY347374

—

—

—

C. donetzica

MFLUCC 16-0574

Rosa sp.

Russia

KY417731

KY417697

—

—

C. elaeagni

CFCC 89632

Elaeagnus angustifolia

Guyuan, Ningxia, China

KF765676

—

—

—

C. eriobotryae

IMI 136523

Eriobotrya japonica

Saharanpur, India

AY347327

—

—

—

C. erumpens

MFLUCC 16-0580

Salix xfragilis

Russia

KY417733

KY417699

—

—

C. eucalypticola

ATCC 96150

Eucalyptus nitens

Tasmainia, Australia

AY347358

—

—

—

C. eucalyptina

CMW5882

Eucalyptus grandis

Cali, Colombia

AY347375

—

—

—

C. eugeniae

CBS 118569

Eugenia sp.

Tanzania

AY347344

—

—

—

C. fraxinigena

MFLUCC 14-0868

Fraxinus ornus

Italy

MF190133

—

—

—

C. fugax

CBS 203.42

Salix sp.

Switzerland

AY347323

—

—

—

C. gigalocus

HMBF155

Juglans regia

Xining, Qinghai, China

KF225609

—

—

—

C. gigaspora

CFCC 89634

Salix psammophila

China

KF765671

KU711000

—

—

C. hippophaes

CFCC 89639

Hippophae rhamnoides

Gannan, Gansu, China

KF765681

—

—

—

C. junipericola

MFLUCC 17-0882

Juniperus communis

Italy

MF190125

—

—

—

C. kantschavelii

287-2

Populus deltoides

Iran

EF447367

—

—

—

C. leucosperma

CBS 191.42

Taxus baccata

Switzerland

AY347330

—

—

—

C. longiostiolata

MFLUCC 16-0628

Salix ×fragilis

Russia

KY417734

—

—

—

C. melnikii

MFLUCC 15-0851

Malus domestica

Russia

KY417735

KY417701

—

—

C. multicollis

CBS 105.89

Quercus ilex subsp. rotundifolia

Spain

DQ243803

—

—

—

C. myrtagena

HiloTibl

Tibouchina urvilleana

Hilo, Hawaii, USA

AY347363

—

—

—

C. nitschkii

CMW 10180

Eucalyptus globulus

Wondo Genet, Ethiopia

AY347356

—

—

—

C. nivea

CFCC 89642

Salix psammophila

Yulin, Shaanxi, China

KF765684

KU711006

—

—

C. notastroma

Cottonwood 16

Populus tremuloides

Colorado, USA

JX438631

—

—

—

C. palmoides

CXY1276

Cotinus coggygria

Beijing, Xiangshan, China

JN402990

—

—

—

C. parakantschavelii

MFLUCC 15-0857

Populus xsibirica

Russia

KY417738

KY417704

—

—

C. parasitica

MFLUCC 15-0507

Malus domestica

Russia

KY417740

KY417706

—

—

C. paratranslucens

MFLUCC 15-0506

Populus alba var. bolleana

Russia

KY417741

KY417707

—

—

C. personate

CBS 117.67

Rhododendron ponticum

Netherlands

AY347331

—

—

—

C. pinastri

CBS 194.42

Abies alba

Switzerland

AY347328

—

—

—

C. pini

CBS 197.42

Pinus sylvestris

Switzerland

AY347332

—

—

—

C. populina

CFCC 89644

Salix psammophila

Yulin, Shaanxi, China

KF765686

—

—

—

C. pruinopsis

CFCC 50034

Ulmus pumila

Harbin, Heilongjiang, China

KP281259

—

—

—

C. pruinosa

CBS 118555

Olea europaea v. africana

South Africa

DQ243790

—

—

—

C. punicae

CBS 199.50

Punica granatum

Turkey

JX438622

—

JX438568

—

C. quercicola

MFLUCC 14-0867

Quercus sp.

Italy

MF190129

—

—

—

C. ribis

CFCC 50026

Ulmus pumila

Yulin, Shaanxi, China

KP281267

—

—

—

C. rosae

MFLUCC 14-0845

Rosa canina

Italy

MF190131

—

—

—

C. rosarum

218

Rosa canina

Iran

EF447387

   

C. rostrata

Ls251

Salix cupularis

Gansu, China

KC313890

—

JX438568

—

C. rusanovii

MFLUCC 15-0854

Salix babylonica

Russia

KY417744

KY417710

—

—

C. sacculus

CFCC 89624

Juglans regia

Gannan, Gansu, China

KF225615

—

KP310860

—

C. salicacearum

MFLUCC 15-0509

Salix alba

Russia

KY417745

KY417711

—

—

C. salicicola

MFLUCC 15-0866

Salix alba

Russia

KU982635

KU982637

—

—

C. salicina

MFLUCC 15-0862

Salix alba

Russia

KY417750

KY417716

—

—

C. schulzeri

CBS 118570

Malus domestica

Michigan, USA

DQ243802

—

—

—

C. sequioae

CBS 116815

Sequoia sempervirens

California, USA

AY347340

—

—

—

C. sibiraeae

CFCC 50045

Sibiraea angustata

Gannan, Gansu, China

KP340987

—

—

—

C. sophorae

CFCC 89598

Sophora japonica

China

KR045654

KU711018

KU710941

KR045695

C. sophoricola

CFCC 89595

Sophora japonica var. pendula

Gannan, Gansu, China

KC880148

—

—

—

C. sorbi

MFLUCC 16-0631

Sorbus aucuparia

Russia

KY417752

KY417718

—

—

C. sorbicola

MFLUCC 16-0584

Acer pseudoplatanus

Russia

KY417755

KY417721

—

—

C. spiraeae

CFCC 50049

Spiraea salicirolia

Gansu, China

MG707859

MG708196

  

C. tanaitica

MFLUCC 14-1057

Betula pubescens

Russia

KT459411

KT459413

—

—

C. translucens

CBS 152.42

Salix sp.

St. Moritz, Switzerland

AF191182

—

—

—

C. ulmi

MFLUCC 15-0863

Ulmus minor

Russia

KY417759

KY417725

—

—

C. valsoidea

CMW 4309

Eucalyptus grandis

Sumatra, Indonesia

AF192312

—

—

—

C. variostromatica

CMW 6766

Eucalyptus globulus

Orbost, Victoria, Australia

AY347366

—

—

—

C. vinacea

CBS 141585

Vitis interspecific hybrid ‘Vidat

New Hampshire, USA

KX256256

—

KX256277

—

C. viticola

CBS 141586

Vitis vinifera ‘Cabernet Franc’

Connecticut, USA

KX256239

—

KX256260

—

Diaporthe ampelina

Wolf912

Vitis vinifera ‘Thompson seedless’

Solano Co., California, USA

KM669964

JGI

KM669820

JGI

Diaporthe benedicti

SBen914

Salix sp.

San Benito Co., California, USA

KM669929

—

KM669785

—

Leucostoma parapersoonii

CBS 116845

Pyrus serotina

Michigan, USA

AF191181

   

Valsa sordida

CBS 197.50

Populus tremula

United Kingdom

AY347322

—

—

—

  1. aIsolates in bold represent type specimens.
  2. bJGI Represents sequences that were retreived from the JGI Mycocosm genome portal.