Table 1 Statistics of Claviceps genomes sequenced in this study.
Species | Strain | Voucher # | Version # | number of contigs | Number of protein coding gene models | Total length (bp) | N50 (bp) | L50 | GC (%) | Coverage (x) | Complete BUSCO’s (%) |
|---|---|---|---|---|---|---|---|---|---|---|---|
Claviceps purpurea s.str. | LM28 | DAOMC 250647 | QERD01000000 | 1930 | 8977 | 30251759 | 32494 | 269 | 51,7 | 39 | 97,9 |
Claviceps purpurea s.str. | LM582 | DAOMC 251723 = CCC7718 | QERA01000000 | 2207 | 8777 | 30199509 | 27733 | 327 | 51,7 | 72 | 98,6 |
Claviceps purpurea s.lat. | LM78 | DAOMC 250578 | QEQY01000000 | 2321 | 8410 | 28571566 | 21589 | 416 | 51,4 | 52 | 97,3 |
Claviceps purpurea s.lat. | LM81 | DAOMC 250581 | QEQX01000000 | 1423 | 9008 | 30694913 | 46550 | 190 | 51,5 | 305 | 96,9 |
Claviceps purpurea s.lat. | LM458 | DAOMC 251898 | QEQW01000000 | 1698 | 9230 | 35875594 | 41916 | 189 | 51,9 | 66 | 98 |
Claviceps cf. spartinae | LM218 | DAOMC 251843 | QERE01000000 | 1630 | 8960 | 30598250 | 39984 | 229 | 51,4 | 214 | 97,6 |
Claviceps cf. spartinae | LM454 | DAOMC 251845 | QERC01000000 | 2108 | 9038 | 30692584 | 28795 | 307 | 51,4 | 126 | 97,9 |
Claviceps humidiphila | LM576 | DAOMC 251717 = CCC4348 | QERB01000000 | 1831 | 9040 | 30488243 | 35139 | 257 | 51,5 | 63 | 97,9 |
Claviceps arundinis | LM583 | DAOMC 251724 = CCC9338 | QEQZ01000000 | 1613 | 8855 | 30055381 | 39989 | 219 | 51,4 | 56 | 96,9 |
Claviceps purpurea s.sre.b | 20,1 | Â | Â | 1442 | 8 823 | 30901872 | 46498 | 197 | 51,6 | 39 | 97,6 |